Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 U4.6-201ENST00000621618 127 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 RPL7P44-201ENST00000424827 742 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AC092447.2-201ENST00000435487 669 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 RPL26P28-201ENST00000451325 435 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AC098824.1-201ENST00000453565 980 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AC006445.1-201ENST00000491925 405 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 RPL7P23-201ENST00000493874 747 ntBASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PHRF1Q9P1Y6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PHRF1Q9P1Y6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.84□□□□□ -1.64
PHRF1Q9P1Y6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
PHRF1Q9P1Y6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC007685.1-201ENST00000329806 452 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 RN7SKP53-201ENST00000411337 315 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 SUMO2P20-201ENST00000520803 283 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC006116.10-201ENST00000591836 581 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AL133383.2-201ENST00000622958 2336 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AL353743.1-202ENST00000431724 1695 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 HLFP1-201ENST00000402375 499 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC017079.2-201ENST00000416102 485 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 RPF2P1-201ENST00000424137 906 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC010655.1-201ENST00000449336 292 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 RPL21P13-201ENST00000488305 481 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AP005205.1-201ENST00000563503 508 ntBASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.83□□□□□ -1.64
PHRF1Q9P1Y6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AL031595.2-201ENST00000624215 19071 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AL034403.1-201ENST00000399414 885 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AC096638.2-201ENST00000434965 711 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 RN7SL807P-201ENST00000470923 297 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 MIR5004-201ENST00000579078 107 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AC012603.1-201ENST00000606424 528 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 AC063952.1-203ENST00000634410 658 ntBASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHRF1Q9P1Y6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 RHOT1P2-201ENST00000366423 333 ntBASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 OR2X1P-201ENST00000421144 687 ntBASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 AL671855.1-201ENST00000446875 1203 ntBASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 RPS3AP14-201ENST00000483907 780 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms