Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC016716.1-201ENST00000265882 708 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 RNU6-353P-201ENST00000364266 108 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 HSPD1P16-201ENST00000402302 394 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AL450992.3-201ENST00000413192 568 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC009237.10-201ENST00000414112 510 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 CENPIP1-201ENST00000425713 902 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 RWDD4P2-201ENST00000426392 563 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 VN1R32P-201ENST00000452234 905 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 HMGN3P1-201ENST00000453847 193 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 NAP1L1P3-201ENST00000462291 880 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC118282.2-201ENST00000508739 374 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC100770.1-201ENST00000532310 322 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 NIFKP8-201ENST00000560500 874 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC090666.1-201ENST00000578241 445 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AP001542.2-201ENST00000593141 364 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC068790.4-201ENST00000602474 263 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC008745.1-201ENST00000604064 271 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AP003117.2-201ENST00000606010 545 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC105227.2-201ENST00000615075 605 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC099669.2-201ENST00000616549 437 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC073342.3-201ENST00000624211 193 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC126544.2-201ENST00000625174 749 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AL596275.2-204ENST00000641628 552 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AL596275.2-206ENST00000641957 626 ntBASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
BLOC1S4Q9NUP1 AC000123.3-201ENST00000624029 4975 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL592182.3-201ENST00000642132 3304 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 OR5P1P-201ENST00000299512 925 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 OR52B1P-201ENST00000316506 909 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MIR331-201ENST00000362302 94 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 RNU6-1000P-201ENST00000391066 106 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 DSTNP4-201ENST00000399472 474 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL583835.1-201ENST00000399570 407 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MIR1911-201ENST00000410783 80 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ELOCP19-201ENST00000411919 318 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 UBTFL3-201ENST00000418934 1024 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 RPL31P45-201ENST00000419532 356 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 PAICSP7-201ENST00000419829 962 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 SKP1P3-201ENST00000429280 487 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MTCYBP15-201ENST00000433123 1127 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 snoU13.7-201ENST00000459220 104 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 UBTFL6-201ENST00000477929 1024 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 RPL21P103-201ENST00000479921 488 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 SNX5P1-201ENST00000505757 1041 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 IGLV3-26-201ENST00000520756 302 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 OR5BC1P-201ENST00000529327 739 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MTND5P21-201ENST00000531961 522 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 CENPUP2-201ENST00000555897 1186 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC023825.1-201ENST00000566704 1030 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC008687.2-201ENST00000597865 520 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC011492.1-201ENST00000600023 315 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms