Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 VN1R32P-201ENST00000452234 905 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC010469.1-201ENST00000463864 576 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 MTND2P31-201ENST00000512602 616 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC103833.1-201ENST00000517442 172 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC010201.1-201ENST00000605051 540 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC055764.2-201ENST00000610089 670 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC026368.1-201ENST00000614934 690 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC004825.2-201ENST00000616634 455 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC007546.2-201ENST00000623996 360 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC100871.1-201ENST00000507871 1456 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC096656.1-201ENST00000623826 1364 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 RPL21P65-201ENST00000406094 466 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 RPL7P22-201ENST00000466005 733 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 RPL23AP12-201ENST00000467573 473 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC093014.1-201ENST00000548926 724 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AL109741.3-201ENST00000561748 592 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC233266.2-201ENST00000567067 528 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC245389.1-201ENST00000605141 529 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 Z98200.1-201ENST00000607298 470 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC023509.5-201ENST00000617434 807 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC090617.9-201ENST00000623751 147 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC004943.3-201ENST00000624116 600 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC034229.5-201ENST00000624258 185 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 AC008013.2-202ENST00000637965 364 ntBASIC4.39□□□□□ -1.71
HPS4Q9NQG7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
HPS4Q9NQG7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RLIMP1-201ENST00000339626 1680 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RNA5SP513-201ENST00000364648 118 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 TAF9BP2-201ENST00000400856 499 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AL389915.1-201ENST00000422463 466 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MORF4L1P7-201ENST00000426038 703 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RPL23AP25-201ENST00000430973 463 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 BMS1P19-201ENST00000433925 393 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC108729.2-201ENST00000476543 840 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 COL6A4P2-205ENST00000509855 506 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms