Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC004865.1-201ENST00000442276 1003 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 OR1H1P-201ENST00000448731 937 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 NPM1P39-201ENST00000449818 867 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 HMGN3P1-201ENST00000453847 193 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 NDUFA12P1-201ENST00000455914 406 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 RN7SL459P-201ENST00000481078 302 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC109471.1-201ENST00000511631 612 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 RAB9BP1-201ENST00000519581 626 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC012339.2-201ENST00000523996 453 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AL359219.2-201ENST00000555184 348 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC017100.2-201ENST00000584628 355 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC004987.4-201ENST00000603383 338 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC135507.1-201ENST00000607214 561 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC243756.2-201ENST00000618406 463 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC015804.1-201ENST00000622935 435 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC107982.1-201ENST00000507171 1300 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC011477.1-204ENST00000623416 1325 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC019072.1-201ENST00000604535 1551 ntBASIC5.63□□□□□ -1.51
VTA1Q9NP79 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.63□□□□□ -1.51
VTA1Q9NP79 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTA1Q9NP79 USP9YP4-201ENST00000424401 1745 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC00561-201ENST00000565815 2738 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC009229.4-201ENST00000623854 1947 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC005332.5-201ENST00000591222 2919 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 RNU1-32P-201ENST00000363937 159 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 RNU6-115P-201ENST00000364310 107 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 Y_RNA.318-201ENST00000365131 97 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 RNA5SP241-201ENST00000391326 114 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL031577.2-201ENST00000404133 280 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 HNRNPDP2-201ENST00000406475 478 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 RAB28P1-201ENST00000411517 641 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL359265.2-201ENST00000434367 631 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL117351.1-201ENST00000438864 766 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 ELOCP8-201ENST00000439309 332 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ELOCP15-201ENST00000442090 332 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC004980.3-201ENST00000447046 365 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AURKAPS2-201ENST00000454983 333 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 NF1P3-201ENST00000457709 450 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 RPL5P22-201ENST00000480199 884 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 OR2A20P-203ENST00000498397 1268 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC147055.4-201ENST00000504399 745 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 MTATP6P22-201ENST00000507369 598 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC005178.1-201ENST00000508392 440 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC117532.1-201ENST00000514638 323 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 RNU6-885P-201ENST00000516607 104 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC027309.2-201ENST00000520566 192 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 ARL2BPP5-201ENST00000523141 481 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AF279873.1-201ENST00000523393 313 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 SERPINE4P-201ENST00000554978 281 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AP005136.1-201ENST00000579765 429 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AP000811.1-201ENST00000603803 651 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 MIR378J-201ENST00000611988 109 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 HULC.1-201ENST00000612720 240 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms