Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AL139039.2-201ENST00000407436 479 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 MTND2P15-201ENST00000418575 892 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 PRSS3P4-201ENST00000453323 162 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 OR5AP1P-201ENST00000529730 940 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 OR6C71P-202ENST00000641886 1107 ntBASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
KIAA1549Q9HCM3 AC106871.1-201ENST00000568324 3102 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AL356489.2-201ENST00000566968 3528 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 CYP4F29P-201ENST00000420685 446 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC074367.1-201ENST00000438685 1125 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 SNORA71B-202ENST00000439232 272 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC239798.3-201ENST00000454459 408 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC099560.2-201ENST00000457554 255 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 HMGN1P15-201ENST00000513870 295 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC090281.1-201ENST00000523019 276 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC092747.2-201ENST00000545069 983 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC107016.1-201ENST00000550463 337 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC090877.1-201ENST00000561418 344 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC012468.1-201ENST00000604888 430 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 HMGB1P50-201ENST00000605814 607 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC103858.2-201ENST00000621471 543 ntBASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
KIAA1549Q9HCM3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MIR1183-201ENST00000408856 89 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 RNA5SP39-201ENST00000411245 120 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 RPL21P109-201ENST00000422213 475 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 IFNNP1-201ENST00000429219 553 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC096638.2-201ENST00000434965 711 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 HSPD1P21-201ENST00000436541 245 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC105918.1-201ENST00000474399 838 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC021733.2-201ENST00000518830 497 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC012314.7-201ENST00000619693 93 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL139089.1-201ENST00000620372 975 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 FAM35DP-201ENST00000323387 2712 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 SNORD9-201ENST00000362566 104 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MIR137-201ENST00000385223 102 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 RPL23AP48-201ENST00000406913 488 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC073136.2-201ENST00000417282 849 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC245054.1-201ENST00000420944 258 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 HMGB3P9-201ENST00000441799 583 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms