Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HMGB1P21-201ENST00000502313 581 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 RNU6-548P-201ENST00000517083 115 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 RPL23AP87-202ENST00000573039 466 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC008966.2-201ENST00000606157 453 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC018692.3-201ENST00000623929 123 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AL034403.1-201ENST00000399414 885 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AL078604.1-201ENST00000404609 466 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 TRGV5P-201ENST00000419915 354 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 RPL36AP21-201ENST00000490372 323 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC087369.1-201ENST00000520775 996 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC079089.3-201ENST00000603094 673 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 PGBD4P8-201ENST00000412993 562 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 RPS26P2-201ENST00000440331 348 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AL035404.1-201ENST00000497982 568 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC016727.1-205ENST00000605437 569 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC024341.1-201ENST00000526444 1552 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 RNU6-482P-201ENST00000391068 107 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC093698.1-201ENST00000423843 571 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 SLC31A1P1-201ENST00000451221 567 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC025627.2-201ENST00000576220 160 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AL163642.2-201ENST00000604722 1019 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AC064801.1-201ENST00000612025 407 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 AL139089.1-201ENST00000620372 975 ntBASIC3.49□□□□□ -1.85
CHD8Q9HCK8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHD8Q9HCK8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC109446.4-201ENST00000623235 2755 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 Y_RNA.4-201ENST00000362333 112 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 MTCO1P39-201ENST00000426148 480 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AL390816.3-201ENST00000604527 1066 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC073136.1-201ENST00000449426 2884 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 RPS4XP8-201ENST00000402039 771 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AL138885.1-201ENST00000405921 675 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC048351.1-201ENST00000420064 602 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 RBMY1KP-201ENST00000423480 476 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 UBE2NP1-201ENST00000545592 458 ntBASIC3.48□□□□□ -1.85
CHD8Q9HCK8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.48□□□□□ -1.85
CHD8Q9HCK8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 GSTA8P-201ENST00000404253 637 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 HIGD1AP4-201ENST00000430194 280 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 RPL21P112-201ENST00000434403 463 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC239809.1-201ENST00000450470 217 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC008837.1-201ENST00000511513 412 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms