Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 FAR2P2-201ENST00000413041 594 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AL035458.1-201ENST00000433096 585 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 MTCYBP21-201ENST00000443300 1113 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 RNU6-775P-201ENST00000459318 96 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 SNORD108-201ENST00000459332 71 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC096992.1-201ENST00000459808 709 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 RN7SL604P-201ENST00000492589 296 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 OR9N1P-202ENST00000494289 481 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 RPS27AP13-201ENST00000498403 237 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC106806.2-201ENST00000509365 500 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 KRT19P6-201ENST00000510983 209 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 MTND1P6-201ENST00000523621 946 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 MIR7151-201ENST00000617477 60 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC103858.2-201ENST00000621471 543 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC053481.2-202ENST00000582394 1500 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC009501.3-201ENST00000605001 1352 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AL049737.1-201ENST00000413920 1403 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RNU1-32P-201ENST00000363937 159 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC083799.1-201ENST00000366451 910 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RNU6-98P-201ENST00000384173 107 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 MIR3074-201ENST00000384885 81 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC092832.1-201ENST00000422934 400 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 MTND2P11-201ENST00000423638 648 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RPL23AP38-201ENST00000423801 469 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RPL18P10-201ENST00000425606 538 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AL358472.1-201ENST00000431295 329 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RPL23AP71-201ENST00000470966 469 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 RPL31P61-201ENST00000496160 376 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC025627.2-201ENST00000576220 160 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 MIR4284-201ENST00000578924 81 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 CBX3P2-202ENST00000583365 535 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC005242.1-201ENST00000585658 438 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC006116.5-201ENST00000591936 559 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AL392112.1-201ENST00000605115 829 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC005261.4-201ENST00000600047 1385 ntBASIC4.13□□□□□ -1.75
LRRC40Q9H9A6 AC022031.1-201ENST00000585985 2593 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 LINC02471-203ENST00000641941 4752 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 AC136624.1-201ENST00000400791 413 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 HMGB1P13-201ENST00000406019 642 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 MIR1251-201ENST00000408552 70 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 RPL31P45-201ENST00000419532 356 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
LRRC40Q9H9A6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms