Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC083809.1-201ENST00000615051 472 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 FTX_2.1-201ENST00000618816 94 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AL121949.2-201ENST00000403446 1548 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNF6P1-201ENST00000444889 1784 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AL359976.1-201ENST00000418655 3528 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RPL23AP57-201ENST00000332361 466 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.46-201ENST00000362695 102 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SNORD116-23-201ENST00000384645 92 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MIR1-2-201ENST00000384961 85 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SNORD37.1-201ENST00000390968 65 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AL139397.2-201ENST00000404529 772 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC104837.2-201ENST00000427236 424 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC016712.1-201ENST00000431088 378 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC092013.1-201ENST00000438795 332 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC103987.1-201ENST00000473394 348 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RN7SL326P-201ENST00000477493 296 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RPL21P99-201ENST00000480369 423 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC025465.3-201ENST00000510570 311 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MTND1P19-201ENST00000511780 315 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1023P-201ENST00000516137 106 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RNU6-201P-201ENST00000517100 61 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC022360.1-201ENST00000521058 340 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 OR5M2P-201ENST00000529003 936 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC090312.2-201ENST00000582687 378 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 BX664608.1-201ENST00000610519 487 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC018926.3-201ENST00000618841 406 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC098657.3-201ENST00000620434 263 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AL512643.1-201ENST00000635735 524 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 AC025470.1-201ENST00000510053 2032 ntBASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL25A1Q9BXS0 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms