Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKP4Q99569 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PKP4Q99569 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 AC135352.1-201ENST00000506173 1418 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 AC018529.3-201ENST00000624212 2254 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PKP4Q99569 RNU5B-1-201ENST00000363286 116 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PKP4Q99569 SNORD116-8-201ENST00000384365 95 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PKP4Q99569 ATF1P1-201ENST00000406040 927 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 RN7SKP106-201ENST00000410832 272 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 RNU2-6P-201ENST00000411404 190 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AL139128.1-201ENST00000413921 941 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 LUZP4P1-201ENST00000415420 344 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC234782.4-201ENST00000417646 1048 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 RBMY2KP-201ENST00000418221 992 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 PNRC2P1-201ENST00000423940 420 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC104763.1-201ENST00000475274 360 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 RPL12P20-201ENST00000475538 479 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC083829.1-201ENST00000503756 657 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC093752.1-206ENST00000511823 336 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC007016.1-201ENST00000512110 244 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 RNU6-1028P-201ENST00000517164 93 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC008562.1-201ENST00000521763 330 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 COX6B1P6-201ENST00000522347 255 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 LRRC6P1-201ENST00000532188 885 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 AP003717.3-201ENST00000544832 1180 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.5□□□□□ -1.69
PKP4Q99569 VN1R78P-201ENST00000597393 564 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AL451086.1-201ENST00000605596 223 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC107952.2-201ENST00000606048 486 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.5□□□□□ -1.69
PKP4Q99569 AC243756.2-201ENST00000618406 463 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 AP002782.1-201ENST00000623107 614 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 BX649567.1-201ENST00000642071 1134 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PKP4Q99569 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PKP4Q99569 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
PKP4Q99569 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.49□□□□□ -1.69
PKP4Q99569 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.49□□□□□ -1.69
PKP4Q99569 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
PKP4Q99569 RN7SKP115-201ENST00000363177 317 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 RNU4-68P-201ENST00000364314 141 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKP4Q99569 Z98745.1-201ENST00000402553 494 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 RNU2-65P-201ENST00000410162 185 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 HMGB1P49-201ENST00000418882 569 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 RPL21P43-201ENST00000425440 472 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AC023347.2-201ENST00000433994 462 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.49□□□□□ -1.69
PKP4Q99569 AC000041.1-201ENST00000439655 175 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.49□□□□□ -1.69
PKP4Q99569 Z80107.2-201ENST00000445127 392 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 TPTE2P6-202ENST00000445572 1007 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.49□□□□□ -1.69
PKP4Q99569 RSL24D1P3-201ENST00000449255 495 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 CYCSP42-201ENST00000450823 238 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.49□□□□□ -1.69
PKP4Q99569 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.49□□□□□ -1.69
PKP4Q99569 PTGES3P5-201ENST00000455109 434 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AL445433.1-201ENST00000457507 257 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 SCARNA10-201ENST00000459255 330 ntBASIC4.49□□□□□ -1.69
PKP4Q99569 AC010326.1-201ENST00000462726 602 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms