Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC026422.1-201ENST00000623961 452 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.96□□□□□ -1.45
IFT140Q96RY7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.96□□□□□ -1.45
IFT140Q96RY7 AC005261.6-201ENST00000623072 1387 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.96□□□□□ -1.45
IFT140Q96RY7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
IFT140Q96RY7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
IFT140Q96RY7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
IFT140Q96RY7 AP000542.2-201ENST00000623199 6179 ntBASIC5.96□□□□□ -1.46
IFT140Q96RY7 AC025750.2-201ENST00000442609 450 ntBASIC5.96□□□□□ -1.46
IFT140Q96RY7 AC010655.1-201ENST00000449336 292 ntBASIC5.96□□□□□ -1.46
IFT140Q96RY7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.96□□□□□ -1.46
IFT140Q96RY7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
IFT140Q96RY7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.96□□□□□ -1.46
IFT140Q96RY7 RPL12P50-201ENST00000603116 116 ntBASIC5.96□□□□□ -1.46
IFT140Q96RY7 AL133247.2-201ENST00000603236 482 ntBASIC5.96□□□□□ -1.46
IFT140Q96RY7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.96□□□□□ -1.46
IFT140Q96RY7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
IFT140Q96RY7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.95□□□□□ -1.46
IFT140Q96RY7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
IFT140Q96RY7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
IFT140Q96RY7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.95□□□□□ -1.46
IFT140Q96RY7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
IFT140Q96RY7 MFSD8-233ENST00000641482 4860 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.95□□□□□ -1.46
IFT140Q96RY7 AL691447.1-201ENST00000419456 387 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 AL158071.1-201ENST00000430315 461 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 VN1R40P-201ENST00000455196 941 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 CR383656.14-201ENST00000551951 406 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 AC084036.1-201ENST00000609190 508 ntBASIC5.95□□□□□ -1.46
IFT140Q96RY7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AC119744.1-201ENST00000454746 1715 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 SNORA44-201ENST00000384584 132 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 DPPA2P2-201ENST00000418220 897 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AL121594.4-201ENST00000556211 1196 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.94□□□□□ -1.46
IFT140Q96RY7 AC093732.2-201ENST00000607950 274 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 OR51C1P-201ENST00000608504 942 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 AP000255.1-201ENST00000610276 676 ntBASIC5.94□□□□□ -1.46
IFT140Q96RY7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
IFT140Q96RY7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 MTCO1P24-201ENST00000515438 1558 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 AC006484.1-201ENST00000435086 1884 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.93□□□□□ -1.46
IFT140Q96RY7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
IFT140Q96RY7 KCTD9P3-201ENST00000434597 1169 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.93□□□□□ -1.46
IFT140Q96RY7 RPL12P18-201ENST00000437175 325 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 TPT1P1-201ENST00000458495 518 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 HMGB1P21-201ENST00000502313 581 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 FTH1P24-201ENST00000503502 462 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 HMGB3P13-201ENST00000511263 607 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 IGLV3-26-201ENST00000520756 302 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 MIR3945-201ENST00000581853 98 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
IFT140Q96RY7 U4.6-201ENST00000621618 127 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 UBE3AP2-201ENST00000429033 2259 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 AC092435.3-201ENST00000565538 3654 ntBASIC5.93□□□□□ -1.46
IFT140Q96RY7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.93□□□□□ -1.46
IFT140Q96RY7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 AL022322.2-201ENST00000624072 20397 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 RNU1-140P-201ENST00000365040 165 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 REREP1Y-201ENST00000422655 198 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 SDCBPP2-201ENST00000424643 885 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 REREP2Y-201ENST00000439103 200 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 AC139783.2-201ENST00000504847 1145 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 IGKV2-26-201ENST00000518305 343 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 MIR4276-201ENST00000584832 70 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 AC006539.2-201ENST00000601729 572 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 AC013412.1-201ENST00000610687 192 ntBASIC5.92□□□□□ -1.46
IFT140Q96RY7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
IFT140Q96RY7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
IFT140Q96RY7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms