Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 SNORA51.12-201ENST00000384448 134 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 NRBF2P2-201ENST00000413087 861 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 TMBIM7P-201ENST00000418074 855 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 OR2AM1P-201ENST00000422137 422 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 OR2AH1P-201ENST00000425717 928 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 ATP5F1P1-201ENST00000433775 569 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 SEPT7P5-201ENST00000434048 306 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 RPS17P8-201ENST00000434525 335 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC093155.1-201ENST00000440164 826 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AL357520.1-201ENST00000441557 453 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 RPL37P3-201ENST00000456825 293 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AL133477.1-201ENST00000457472 514 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 OR52A4P-201ENST00000472867 958 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 VPS26AP1-201ENST00000483197 979 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AP000619.3-201ENST00000535634 1127 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 GCSHP4-201ENST00000538792 439 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AL442163.2-201ENST00000553912 710 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 MIR4716-201ENST00000579628 84 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 MIR4646-201ENST00000580775 63 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 Z99497.2-201ENST00000603634 310 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AL031281.1-201ENST00000604049 488 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AP003973.1-201ENST00000604639 691 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AP004247.3-201ENST00000608682 624 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC090246.1-201ENST00000616499 426 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AP003072.4-201ENST00000624580 310 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 Z99496.1-201ENST00000469424 1477 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 USP9YP4-201ENST00000424401 1745 ntBASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL136164.3-201ENST00000624429 3978 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 SAMMSON-226ENST00000642089 1582 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 OR52B1P-201ENST00000316506 909 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 RN7SKP104-201ENST00000362605 328 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-619P-201ENST00000365146 108 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC114755.2-201ENST00000413520 361 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 COX6B1P1-201ENST00000415962 213 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 MRPS36P1-201ENST00000421291 307 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL365396.1-201ENST00000430854 671 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 USP9YP31-201ENST00000431405 881 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 PPIAP17-201ENST00000438507 471 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC092393.1-201ENST00000439625 742 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 COX6CP18-201ENST00000448769 222 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 RPL21P134-201ENST00000453468 483 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL645937.3-201ENST00000453647 936 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 RPS27P23-201ENST00000487608 251 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 GAPDHP56-201ENST00000506031 988 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC109471.1-201ENST00000511631 612 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 BTF3P13-201ENST00000513224 490 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AP000676.2-201ENST00000529711 301 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 PDCD5P1-201ENST00000543528 309 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LSM3P2-201ENST00000551246 273 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC068446.3-201ENST00000555285 382 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC008015.1-201ENST00000555505 465 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 DUXAP1-201ENST00000556632 463 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC090312.1-201ENST00000580637 348 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 NF1P5-201ENST00000588287 448 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms