Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-1000P-201ENST00000391066 106 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC096533.1-201ENST00000411645 353 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RSU1P3-201ENST00000412878 835 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC027644.1-201ENST00000419595 298 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SFR1P2-201ENST00000421841 730 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 CENPIP1-201ENST00000425713 902 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC011753.3-201ENST00000443436 406 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SNORD108-201ENST00000459332 71 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RPL36AP41-201ENST00000493820 306 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC069306.1-201ENST00000507006 843 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 PPBPP1-201ENST00000510807 373 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC016065.2-201ENST00000514530 444 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNA5SP497-201ENST00000516081 97 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNU2-30P-201ENST00000516209 141 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SCARNA21.2-201ENST00000516600 166 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNA5SP34-201ENST00000516887 130 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 OR8L1P-201ENST00000534005 955 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC008033.2-201ENST00000542626 177 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 HAUS8P1-201ENST00000549005 542 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AP001542.2-201ENST00000593141 364 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC023762.1-201ENST00000603280 584 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AL391358.1-201ENST00000605342 190 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC112503.1-201ENST00000608436 391 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AL133412.1-201ENST00000380194 2992 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 AC026951.1-201ENST00000559530 2459 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RNU1-63P-201ENST00000383902 164 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RNU6-1176P-201ENST00000390955 107 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RPL31P2-201ENST00000413849 377 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC092634.2-201ENST00000428146 1010 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 RPL36P19-201ENST00000430744 301 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC011242.1-201ENST00000433596 1158 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 Z99714.1-201ENST00000450463 807 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 OR52J1P-201ENST00000450596 932 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL645939.1-201ENST00000453429 797 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC009963.2-201ENST00000453431 138 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC083829.1-201ENST00000503756 657 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC018797.3-201ENST00000513388 1241 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC104417.1-201ENST00000523974 751 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AP001207.1-201ENST00000524051 481 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AP001880.2-201ENST00000538233 448 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 ZNF971P-201ENST00000562068 1249 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC090181.2-201ENST00000602975 672 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC008638.3-201ENST00000603341 463 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC087763.1-201ENST00000603391 286 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL139395.1-201ENST00000603662 160 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC010201.1-201ENST00000605051 540 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms