Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC126755.2-208ENST00000327792 462 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC138969.1-213ENST00000331436 462 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 MIR141-201ENST00000384975 95 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 ENSAP1-201ENST00000392855 326 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 HLFP1-201ENST00000402375 499 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 RPL7AP73-201ENST00000413490 353 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 MRPL50P1-201ENST00000431951 384 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 MRPS33P4-201ENST00000434892 317 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 H2AFZP6-201ENST00000444403 394 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC009220.1-201ENST00000451614 275 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 RPL21P71-201ENST00000465598 459 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AP000926.1-201ENST00000479573 241 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 IGBP1P5-201ENST00000507524 1000 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 HPRT1P1-201ENST00000509498 657 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 RNU6-362P-201ENST00000516736 90 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC092747.2-201ENST00000545069 983 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC009101.1-201ENST00000568135 242 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC069366.1-201ENST00000583159 838 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 VN1R79P-201ENST00000593540 513 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 BMS1P7-201ENST00000602440 1052 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 BRDTP1-201ENST00000605735 677 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00216-201ENST00000623548 1126 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC019080.5-201ENST00000624891 757 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 CFTRP2-201ENST00000634304 199 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 MIR6830-201ENST00000636015 70 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC119674.1-220ENST00000641502 1048 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 MIR423-201ENST00000362201 94 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 SNORA62.2-201ENST00000364672 152 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 MIR92A2-201ENST00000385299 75 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 HMGB3P19-201ENST00000403971 560 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 TPT1P2-201ENST00000413105 503 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC048351.1-201ENST00000420064 602 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 OR5BE1P-201ENST00000425977 939 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 TRIM60P13-201ENST00000432350 1283 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC007563.3-201ENST00000433233 371 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 ARL5AP3-201ENST00000439327 386 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 MTCO3P16-201ENST00000454456 754 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 RPS23P7-201ENST00000466210 444 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC026979.1-201ENST00000492525 396 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 FABP5P6-201ENST00000510588 409 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 RN7SKP122-201ENST00000515923 296 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 RNU6-491P-201ENST00000516099 110 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC091515.1-201ENST00000548110 679 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC074029.2-201ENST00000551045 634 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC084757.1-201ENST00000559987 490 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 RN7SL600P-201ENST00000581811 299 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC110743.1-201ENST00000584870 478 ntBASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN4IP1Q8WWV3 AC006338.2-201ENST00000616864 791 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms