Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HMGA1P8-201ENST00000414130 321 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 SPA17P1-201ENST00000416656 452 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC018630.2-202ENST00000422992 927 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC093166.4-201ENST00000457867 318 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 RNU6-420P-201ENST00000458780 107 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 RN7SL72P-201ENST00000460697 269 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC130509.1-201ENST00000464158 433 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC104687.1-201ENST00000485829 412 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 KCTD9P2-201ENST00000512203 1013 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 NPM1P21-201ENST00000513394 762 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 SNORA43.3-201ENST00000517240 103 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 BRD9P1-201ENST00000529855 560 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 PARP1P2-201ENST00000556806 195 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC008737.2-201ENST00000599446 118 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC105429.2-201ENST00000610567 517 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC243756.2-201ENST00000618406 463 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AC024940.5-201ENST00000622889 474 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AL353662.3-201ENST00000625131 237 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 MKKS-204ENST00000639674 192 ntBASIC10.05□□□□□ -0.8
TRIM41Q8WV44 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TRIM41Q8WV44 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 PANDAR-201ENST00000629595 1506 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 OR52B1P-201ENST00000316506 909 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 RPS17P17-201ENST00000419392 409 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AL360081.1-201ENST00000428299 555 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC093716.1-201ENST00000435923 377 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 RPL7P29-201ENST00000437151 728 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC079080.1-201ENST00000479841 822 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC008897.1-201ENST00000494006 347 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 RNU6-277P-201ENST00000516272 106 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AP003034.1-201ENST00000534621 422 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC090424.1-201ENST00000535243 736 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AL158196.1-201ENST00000616786 434 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 AC090971.5-201ENST00000621102 293 ntBASIC10.04□□□□□ -0.8
TRIM41Q8WV44 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 CR1-203ENST00000367051 7469 ntTSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC10.04□□□□□ -0.8
TRIM41Q8WV44 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 Y_RNA.422-201ENST00000384054 114 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC016739.1-201ENST00000405359 345 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 OR4K12P-201ENST00000406538 961 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 MIR548P-201ENST00000408336 84 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC024082.2-201ENST00000434771 238 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 HCG14-201ENST00000444986 413 ntTSL 2 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 RPL7P12-201ENST00000446719 750 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 RPL23AP20-201ENST00000447965 421 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 FGF7P3-201ENST00000454645 303 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AC112187.2-201ENST00000604345 283 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AL451049.1-201ENST00000608672 497 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 AP001521.2-201ENST00000608772 546 ntBASIC10.03□□□□□ -0.8
TRIM41Q8WV44 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TRIM41Q8WV44 TPTEP1-208ENST00000636884 213 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms