Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL592494.3-201ENST00000609485 464 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 MIR6716-201ENST00000613413 80 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC020763.5-201ENST00000623298 430 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC090506.2-201ENST00000624521 419 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 CASC19-261ENST00000641853 1638 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 RNU6-328P-201ENST00000390887 106 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AL034403.1-201ENST00000399414 885 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 RPL7AP73-201ENST00000413490 353 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AL356095.1-201ENST00000417217 199 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 MTCO1P52-201ENST00000433928 531 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC093716.1-201ENST00000435923 377 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 TBCAP1-201ENST00000436520 327 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC007537.2-201ENST00000472093 511 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 STRADBP1-201ENST00000478954 1281 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC092451.1-201ENST00000480211 153 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 SNX5P1-201ENST00000505757 1041 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 RN7SKP122-201ENST00000515923 296 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC087369.1-201ENST00000520775 996 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC087888.1-201ENST00000550884 1254 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC006270.2-201ENST00000578523 652 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC007687.1-201ENST00000602704 304 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AL353746.1-201ENST00000566293 6881 ntBASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ZNF439Q8NDP4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 RHEBP3-201ENST00000411920 351 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 RPS17P13-201ENST00000448974 407 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 CFTRP1-201ENST00000456646 183 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 RPL7P19-201ENST00000469948 618 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC026979.1-201ENST00000492525 396 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 RPL7P47-201ENST00000497299 556 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 SNORA31.9-201ENST00000516429 84 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC022790.1-201ENST00000522872 204 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AF230666.2-201ENST00000602328 725 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 RNU4-89P-201ENST00000607443 133 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 MIR6867-201ENST00000610636 67 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AL591424.2-201ENST00000617023 128 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 MIR6830-201ENST00000636015 70 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 AC138649.5-201ENST00000637456 137 ntBASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.23□□□□□ -1.89
ZNF439Q8NDP4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 RNA5SP167-201ENST00000365461 116 ntBASIC3.22□□□□□ -1.89
ZNF439Q8NDP4 AL022722.2-201ENST00000402519 180 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms