Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
PTCHD4Q6ZW05 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCHD4Q6ZW05 NEAT1-202ENST00000501122 22743 ntBASIC4.73□□□□□ -1.65
PTCHD4Q6ZW05 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 KARSP3-201ENST00000571212 1504 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AL049555.1-201ENST00000562834 1933 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AL672167.1-206ENST00000356293 943 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 Y_RNA.18-201ENST00000362461 102 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RNU6-492P-201ENST00000363035 104 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RNU6-1151P-201ENST00000384684 107 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AL390774.1-201ENST00000411924 246 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RPL7P8-201ENST00000411964 730 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RPS15AP38-201ENST00000413110 372 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AL136133.1-201ENST00000413694 376 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC012075.1-201ENST00000436549 580 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 MUPP-201ENST00000438111 566 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RAB11AP1-201ENST00000442978 646 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 HMGN1P36-201ENST00000446623 298 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 OR6C5P-201ENST00000452388 923 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC091965.2-201ENST00000512324 613 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 MTCO2P32-201ENST00000514865 403 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AF279873.1-201ENST00000523393 313 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 MTCYBP20-201ENST00000524239 1129 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC233702.9-201ENST00000581528 203 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 U73023.1-201ENST00000603134 700 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 FO393422.1-201ENST00000603908 708 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC015871.5-202ENST00000623252 701 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC092656.1-203ENST00000624134 423 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC127502.3-201ENST00000636170 1206 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 DBF4P1-201ENST00000412976 1892 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC074029.4-201ENST00000624796 1859 ntBASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCHD4Q6ZW05 SCARNA15-201ENST00000607520 4325 ntBASIC4.71□□□□□ -1.65
PTCHD4Q6ZW05 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL034370.1-201ENST00000397254 1590 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 RNA5SP319-201ENST00000362768 119 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 RNA5SP335-201ENST00000363817 110 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 OR8V1P-201ENST00000395193 873 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 ATP5F1P4-201ENST00000397288 746 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AC013442.1-201ENST00000397347 228 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 U3.32-201ENST00000408116 212 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 MIR1271-201ENST00000408537 86 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 Y_RNA.599-201ENST00000410489 109 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 TPMTP3-201ENST00000411928 735 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 RPL36AP10-201ENST00000421785 322 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AC006366.1-201ENST00000422002 759 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL049610.1-201ENST00000423374 372 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AC002069.1-201ENST00000429649 1159 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 MTND1P30-201ENST00000441241 901 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AP000281.1-201ENST00000444036 316 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 OR52J1P-201ENST00000450596 932 ntBASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD4Q6ZW05 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms