Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDS5AQ29RF7 AC104118.1-201ENST00000607625 1589 ntBASIC4.92□□□□□ -1.62
PDS5AQ29RF7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 RNU6-213P-201ENST00000384051 104 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 RNU4-6P-201ENST00000410804 122 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 TATDN1P1-201ENST00000414123 891 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AL160175.1-201ENST00000428124 247 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC008379.1-201ENST00000463655 464 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 CYCSP20-201ENST00000473154 315 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC110792.1-201ENST00000491826 472 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 PPM1AP1-201ENST00000502740 1135 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC091516.1-201ENST00000549191 703 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 RN7SL339P-201ENST00000580597 296 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AL627171.1-201ENST00000618845 1308 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 MIR6500-201ENST00000622700 86 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 AC008785.1-201ENST00000624475 456 ntBASIC4.91□□□□□ -1.62
PDS5AQ29RF7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDS5AQ29RF7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDS5AQ29RF7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.9□□□□□ -1.62
PDS5AQ29RF7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDS5AQ29RF7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDS5AQ29RF7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 HMGB3P19-201ENST00000403971 560 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 BX664727.1-201ENST00000416024 466 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 VN1R42P-201ENST00000424651 344 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 OR5BE1P-201ENST00000425977 939 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 Z80107.1-201ENST00000436830 412 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 SNRPFP2-201ENST00000440710 251 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 CDC27P1-201ENST00000445384 715 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 OFD1P3Y-201ENST00000453312 783 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 LARP7P4-201ENST00000481075 878 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 SYT14P1-201ENST00000481459 721 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 RN7SL271P-201ENST00000487601 295 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AL121834.1-201ENST00000572284 509 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC090666.1-201ENST00000578241 445 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC124283.4-201ENST00000581815 456 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 MTCO2P22-201ENST00000603246 681 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AC021851.1-201ENST00000608537 1082 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 OR5BE1P-202ENST00000641168 1176 ntBASIC4.9□□□□□ -1.63
PDS5AQ29RF7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PDS5AQ29RF7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 RNU6-252P-201ENST00000363232 107 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC025750.1-201ENST00000399891 379 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 GSTM3P2-201ENST00000412746 530 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 PGBD4P8-201ENST00000412993 562 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 TCEA1P4-201ENST00000415066 844 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC004854.1-201ENST00000440356 349 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms