Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AP004289.2-201ENST00000444413 1457 ntBASIC2.44□□□□□ -2.02
RPL39P62891 SLC2A3P1-201ENST00000519666 1451 ntBASIC2.44□□□□□ -2.02
RPL39P62891 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPL39P62891 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.43□□□□□ -2.02
RPL39P62891 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 PNPT1P2-201ENST00000456768 2050 ntBASIC2.43□□□□□ -2.02
RPL39P62891 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPL39P62891 AL592494.2-201ENST00000425455 1548 ntBASIC2.43□□□□□ -2.02
RPL39P62891 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.43□□□□□ -2.02
RPL39P62891 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 MIR30B-201ENST00000384850 88 ntBASIC2.43□□□□□ -2.02
RPL39P62891 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPL39P62891 RNA5SP293-201ENST00000410527 113 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC096644.3-201ENST00000416788 338 ntBASIC2.43□□□□□ -2.02
RPL39P62891 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 GTF2IP23-201ENST00000423746 351 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC017083.1-201ENST00000428093 483 ntBASIC2.43□□□□□ -2.02
RPL39P62891 OR4F13P-201ENST00000428478 931 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
RPL39P62891 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 AC097262.1-201ENST00000452559 548 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.43□□□□□ -2.02
RPL39P62891 AC007967.1-201ENST00000455422 1159 ntBASIC2.43□□□□□ -2.02
RPL39P62891 RPS7P7-201ENST00000463499 571 ntBASIC2.43□□□□□ -2.02
RPL39P62891 RPL23AP12-201ENST00000467573 473 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC023598.1-201ENST00000472521 361 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.43□□□□□ -2.02
RPL39P62891 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 CBX3P5-201ENST00000552017 521 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.43□□□□□ -2.02
RPL39P62891 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.43□□□□□ -2.02
RPL39P62891 AC025884.1-201ENST00000556034 378 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.43□□□□□ -2.02
RPL39P62891 AC124856.1-201ENST00000600819 896 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC008745.1-201ENST00000604064 271 ntBASIC2.43□□□□□ -2.02
RPL39P62891 U4.6-201ENST00000621618 127 ntBASIC2.43□□□□□ -2.02
RPL39P62891 AC092628.2-201ENST00000622492 339 ntBASIC2.43□□□□□ -2.02
RPL39P62891 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.43□□□□□ -2.02
RPL39P62891 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.43□□□□□ -2.02
RPL39P62891 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPL39P62891 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
RPL39P62891 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.42□□□□□ -2.02
RPL39P62891 RAD1P1-201ENST00000231383 813 ntBASIC2.42□□□□□ -2.02
RPL39P62891 RPL7P26-201ENST00000333817 754 ntBASIC2.42□□□□□ -2.02
RPL39P62891 RNA5SP383-201ENST00000362934 120 ntBASIC2.42□□□□□ -2.02
RPL39P62891 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 MTCO3P31-201ENST00000405526 789 ntBASIC2.42□□□□□ -2.02
RPL39P62891 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.42□□□□□ -2.02
RPL39P62891 RPL18P10-201ENST00000425606 538 ntBASIC2.42□□□□□ -2.02
RPL39P62891 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.42□□□□□ -2.02
RPL39P62891 HMGB3P5-201ENST00000428894 612 ntBASIC2.42□□□□□ -2.02
RPL39P62891 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.42□□□□□ -2.02
RPL39P62891 RPL23AP22-201ENST00000437556 453 ntBASIC2.42□□□□□ -2.02
RPL39P62891 ISCA1P2-201ENST00000438679 421 ntBASIC2.42□□□□□ -2.02
RPL39P62891 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.42□□□□□ -2.02
RPL39P62891 RPL7P19-201ENST00000469948 618 ntBASIC2.42□□□□□ -2.02
RPL39P62891 RPS29P22-201ENST00000472363 168 ntBASIC2.42□□□□□ -2.02
RPL39P62891 AP000893.1-201ENST00000474462 794 ntBASIC2.42□□□□□ -2.02
RPL39P62891 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.42□□□□□ -2.02
RPL39P62891 HMGB1P21-201ENST00000502313 581 ntBASIC2.42□□□□□ -2.02
RPL39P62891 OR5H3P-201ENST00000502817 919 ntBASIC2.42□□□□□ -2.02
RPL39P62891 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.42□□□□□ -2.02
RPL39P62891 AC068657.1-201ENST00000520807 306 ntBASIC2.42□□□□□ -2.02
RPL39P62891 MIR5187-201ENST00000583479 76 ntBASIC2.42□□□□□ -2.02
RPL39P62891 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.42□□□□□ -2.02
RPL39P62891 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPL39P62891 SRP72P2-201ENST00000344851 1979 ntBASIC2.41□□□□□ -2.02
RPL39P62891 AC134882.1-201ENST00000603738 1676 ntBASIC2.41□□□□□ -2.02
RPL39P62891 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPL39P62891 CASC19-255ENST00000641733 1385 ntBASIC2.41□□□□□ -2.02
RPL39P62891 MIR148B-201ENST00000362252 99 ntBASIC2.41□□□□□ -2.02
RPL39P62891 AC136624.1-201ENST00000400791 413 ntBASIC2.41□□□□□ -2.02
RPL39P62891 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RPL39P62891 RNA5SP317-201ENST00000410176 116 ntBASIC2.41□□□□□ -2.02
RPL39P62891 RNA5SP311-201ENST00000411290 116 ntBASIC2.41□□□□□ -2.02
RPL39P62891 Z99755.1-201ENST00000414048 380 ntBASIC2.41□□□□□ -2.02
RPL39P62891 RPL26P29-201ENST00000415623 438 ntBASIC2.41□□□□□ -2.02
RPL39P62891 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.41□□□□□ -2.02
RPL39P62891 AC017079.2-201ENST00000416102 485 ntBASIC2.41□□□□□ -2.02
RPL39P62891 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.41□□□□□ -2.02
RPL39P62891 AIMP1P1-201ENST00000418670 937 ntBASIC2.41□□□□□ -2.02
RPL39P62891 OR8F1P-201ENST00000425243 930 ntBASIC2.41□□□□□ -2.02
RPL39P62891 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.41□□□□□ -2.02
RPL39P62891 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.41□□□□□ -2.02
RPL39P62891 HMGB3P11-201ENST00000440127 604 ntBASIC2.41□□□□□ -2.02
RPL39P62891 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPL39P62891 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.41□□□□□ -2.02
RPL39P62891 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms