Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FTH1P21-201ENST00000512179 511 ntBASIC4.13□□□□□ -1.75
CDH4P55283 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH4P55283 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH4P55283 AC022968.1-201ENST00000567372 442 ntBASIC4.13□□□□□ -1.75
CDH4P55283 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 AL645927.2-201ENST00000618350 349 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH4P55283 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
CDH4P55283 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CDH4P55283 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH4P55283 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CDH4P55283 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH4P55283 RN7SKP44-201ENST00000363602 316 ntBASIC4.12□□□□□ -1.75
CDH4P55283 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH4P55283 RNU6-452P-201ENST00000384406 107 ntBASIC4.12□□□□□ -1.75
CDH4P55283 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDH4P55283 SNORA57.1-201ENST00000391227 145 ntBASIC4.12□□□□□ -1.75
CDH4P55283 MIR1251-201ENST00000408552 70 ntBASIC4.12□□□□□ -1.75
CDH4P55283 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH4P55283 AC092017.2-201ENST00000427600 362 ntBASIC4.12□□□□□ -1.75
CDH4P55283 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH4P55283 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.12□□□□□ -1.75
CDH4P55283 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
CDH4P55283 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH4P55283 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH4P55283 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH4P55283 IGKV2-38-201ENST00000517443 247 ntBASIC4.12□□□□□ -1.75
CDH4P55283 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH4P55283 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH4P55283 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH4P55283 MIR4286-201ENST00000580651 93 ntBASIC4.12□□□□□ -1.75
CDH4P55283 VN1R85P-201ENST00000601587 426 ntBASIC4.12□□□□□ -1.75
CDH4P55283 AP003117.1-201ENST00000602771 554 ntBASIC4.12□□□□□ -1.75
CDH4P55283 AC024941.1-201ENST00000612250 334 ntBASIC4.12□□□□□ -1.75
CDH4P55283 MIR7973-1-201ENST00000614683 76 ntBASIC4.12□□□□□ -1.75
CDH4P55283 AP004607.9-201ENST00000618202 316 ntBASIC4.12□□□□□ -1.75
CDH4P55283 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CDH4P55283 AP003072.4-201ENST00000624580 310 ntBASIC4.12□□□□□ -1.75
CDH4P55283 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH4P55283 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
CDH4P55283 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 SNORA27.3-201ENST00000364937 134 ntBASIC4.11□□□□□ -1.75
CDH4P55283 SNORA3C-201ENST00000408792 125 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 RPS24P8-201ENST00000431490 402 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH4P55283 RNU6-760P-201ENST00000516078 97 ntBASIC4.11□□□□□ -1.75
CDH4P55283 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH4P55283 HMGB1P46-201ENST00000520062 610 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 UBTFL9-201ENST00000534504 1148 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH4P55283 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH4P55283 AC084824.1-201ENST00000550917 1005 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH4P55283 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 MIR4458-201ENST00000578872 75 ntBASIC4.11□□□□□ -1.75
CDH4P55283 NF1P5-201ENST00000588287 448 ntBASIC4.11□□□□□ -1.75
CDH4P55283 VN1R84P-201ENST00000593697 235 ntBASIC4.11□□□□□ -1.75
CDH4P55283 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH4P55283 MIR6500-201ENST00000622700 86 ntBASIC4.11□□□□□ -1.75
CDH4P55283 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH4P55283 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDH4P55283 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH4P55283 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH4P55283 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH4P55283 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDH4P55283 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
CDH4P55283 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms