Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC087565.3-202ENST00000642085 1603 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 RNU4-44P-201ENST00000363050 141 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 MIR199A2-201ENST00000385289 110 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 RPL7P60-201ENST00000397636 735 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 HDGFP1-201ENST00000405943 252 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS2P54868 AC008280.1-201ENST00000418851 412 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS2P54868 MRPS33P4-201ENST00000434892 317 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AP000936.3-201ENST00000438127 255 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 MTCO3P43-201ENST00000440974 771 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS2P54868 GEMIN8P3-201ENST00000445417 720 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 AC104978.1-201ENST00000449387 391 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS2P54868 PPIAP3-201ENST00000450588 505 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 RN7SL585P-201ENST00000470538 280 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 RN7SL809P-201ENST00000482040 297 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 RN7SKP18-201ENST00000516005 275 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 snoU109.6-201ENST00000516831 118 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 IGKV2-23-201ENST00000518729 323 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 DEFB109D-201ENST00000529497 240 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 MIR3200-201ENST00000580767 85 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC005412.1-201ENST00000580812 1049 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC015722.2-201ENST00000622210 551 ntBASIC4.45□□□□□ -1.7
HMGCS2P54868 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGCS2P54868 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS2P54868 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HMGCS2P54868 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGCS2P54868 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC107027.3-201ENST00000565095 3473 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS2P54868 MIR491-201ENST00000384877 84 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 MIR483-201ENST00000385070 76 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC245052.5-201ENST00000416320 649 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AC009302.1-201ENST00000417147 390 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 RPS15AP29-201ENST00000445539 400 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AL035551.1-201ENST00000446931 348 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC005008.1-201ENST00000456151 612 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC074250.1-201ENST00000511117 192 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 IGKV2-38-201ENST00000517443 247 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 OR8X1P-201ENST00000534542 869 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS2P54868 AC092354.2-201ENST00000607786 514 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AL031666.3-201ENST00000609320 1006 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AL773545.4-201ENST00000637262 310 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 AL513478.4-201ENST00000641636 310 ntBASIC4.44□□□□□ -1.7
HMGCS2P54868 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS2P54868 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS2P54868 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS2P54868 MFSD8-236ENST00000641509 4050 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 SCN1A-220ENST00000641603 12506 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS2P54868 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS2P54868 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMGCS2P54868 RNA5SP72-201ENST00000364442 117 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 SNORA68.2-201ENST00000391263 128 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS2P54868 PTMAP5-201ENST00000393073 333 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS2P54868 KRR1P1-201ENST00000419430 803 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 CR848007.2-201ENST00000424918 787 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AL445528.1-201ENST00000426330 420 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AP000907.1-201ENST00000428428 510 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 RPL7P4-203ENST00000430239 730 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms