Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
EPHA4P54764 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHA4P54764 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHA4P54764 AC004972.1-201ENST00000623934 2209 ntBASIC6.34□□□□□ -1.39
EPHA4P54764 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHA4P54764 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHA4P54764 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHA4P54764 AC011460.1-201ENST00000636268 1834 ntBASIC6.34□□□□□ -1.4
EPHA4P54764 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
EPHA4P54764 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.34□□□□□ -1.4
EPHA4P54764 AC012618.3-205ENST00000637896 1496 ntBASIC6.34□□□□□ -1.4
EPHA4P54764 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
EPHA4P54764 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
EPHA4P54764 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 RNU5E-8P-201ENST00000363502 116 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 RNU4-20P-201ENST00000365601 151 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 OR6C66P-201ENST00000414917 930 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 AL358176.2-201ENST00000425769 204 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 PMS2P9-201ENST00000441237 515 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 RNU7-152P-201ENST00000458982 64 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 AC005912.1-201ENST00000495392 255 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC004062.1-201ENST00000509926 645 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 NARSP2-201ENST00000518524 679 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AC073581.1-201ENST00000519036 575 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.33□□□□□ -1.4
EPHA4P54764 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC068993.1-201ENST00000546724 589 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 LSM3P2-201ENST00000551246 273 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AL163153.1-201ENST00000554223 283 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC004817.2-201ENST00000561794 651 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC060771.1-201ENST00000582031 164 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.33□□□□□ -1.4
EPHA4P54764 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 MIR6085-201ENST00000618314 110 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 AL122023.1-201ENST00000622847 530 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.33□□□□□ -1.4
EPHA4P54764 HSPA8P14-201ENST00000552265 1805 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.33□□□□□ -1.4
EPHA4P54764 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
EPHA4P54764 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHA4P54764 AC007993.1-201ENST00000621298 2430 ntBASIC6.33□□□□□ -1.4
EPHA4P54764 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms