Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL445669.2-201ENST00000454425 421 ntBASIC5.05□□□□□ -1.6
COPB1P53618 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.05□□□□□ -1.6
COPB1P53618 RN7SL41P-201ENST00000476144 297 ntBASIC5.05□□□□□ -1.6
COPB1P53618 RPL21P6-201ENST00000479171 504 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC083982.1-201ENST00000485679 344 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.05□□□□□ -1.6
COPB1P53618 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 OR5BM1P-201ENST00000512021 366 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC110775.1-201ENST00000513721 462 ntBASIC5.05□□□□□ -1.6
COPB1P53618 FABP5P12-201ENST00000515543 389 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.05□□□□□ -1.6
COPB1P53618 AP003461.1-201ENST00000528866 78 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC008015.1-201ENST00000555505 465 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC135628.1-201ENST00000568867 534 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.05□□□□□ -1.6
COPB1P53618 RN7SL652P-201ENST00000577769 300 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.05□□□□□ -1.6
COPB1P53618 AC021749.1-201ENST00000604322 607 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC107075.1-201ENST00000613695 314 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC024595.1-201ENST00000623088 387 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC007490.1-201ENST00000624321 703 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
COPB1P53618 OR8B1P-202ENST00000641132 1178 ntBASIC5.05□□□□□ -1.6
COPB1P53618 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 AC000367.1-201ENST00000452711 1766 ntBASIC5.05□□□□□ -1.6
COPB1P53618 INTS6P1-201ENST00000504674 2530 ntBASIC5.05□□□□□ -1.6
COPB1P53618 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 GTF2H2B-203ENST00000508065 1432 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC021755.1-201ENST00000559747 1447 ntBASIC5.05□□□□□ -1.6
COPB1P53618 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COPB1P53618 snoZ40.1-201ENST00000364540 72 ntBASIC5.04□□□□□ -1.6
COPB1P53618 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COPB1P53618 RNA5SP146-201ENST00000410743 123 ntBASIC5.04□□□□□ -1.6
COPB1P53618 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.04□□□□□ -1.6
COPB1P53618 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC005345.1-201ENST00000431868 217 ntBASIC5.04□□□□□ -1.6
COPB1P53618 MTND1P32-201ENST00000433043 938 ntBASIC5.04□□□□□ -1.6
COPB1P53618 HMGB3P10-201ENST00000434734 572 ntBASIC5.04□□□□□ -1.6
COPB1P53618 NPM1P33-201ENST00000438918 872 ntBASIC5.04□□□□□ -1.6
COPB1P53618 THAP5P1-201ENST00000439089 262 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.04□□□□□ -1.6
COPB1P53618 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 ISCUP1-201ENST00000454451 448 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 AC090013.1-201ENST00000485147 480 ntBASIC5.04□□□□□ -1.6
COPB1P53618 RPL36AP41-201ENST00000493820 306 ntBASIC5.04□□□□□ -1.6
COPB1P53618 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 AC098799.3-201ENST00000506095 438 ntBASIC5.04□□□□□ -1.6
COPB1P53618 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.04□□□□□ -1.6
COPB1P53618 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AC021006.3-201ENST00000530771 192 ntBASIC5.04□□□□□ -1.6
COPB1P53618 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.04□□□□□ -1.6
COPB1P53618 NBEAP1-201ENST00000554452 979 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.04□□□□□ -1.6
COPB1P53618 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AC090888.1-201ENST00000561335 1141 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AC005951.1-201ENST00000576706 485 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.04□□□□□ -1.6
COPB1P53618 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.04□□□□□ -1.6
COPB1P53618 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.04□□□□□ -1.6
COPB1P53618 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 MRPS35P3-201ENST00000603189 709 ntBASIC5.04□□□□□ -1.6
COPB1P53618 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.04□□□□□ -1.6
COPB1P53618 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.04□□□□□ -1.6
COPB1P53618 VIS1.1-201ENST00000610517 203 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AL592148.2-201ENST00000612210 372 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC011939.3-201ENST00000613686 466 ntBASIC5.04□□□□□ -1.6
COPB1P53618 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 NSRP1P1-201ENST00000444067 1693 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AC138393.1-206ENST00000540997 1886 ntBASIC5.04□□□□□ -1.6
COPB1P53618 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPB1P53618 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 BMS1P3-201ENST00000372011 932 ntBASIC5.03□□□□□ -1.6
COPB1P53618 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms