Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.34□□□□□ -1.71
ACLYP53396 MTCYBP29-201ENST00000436327 1006 ntBASIC4.34□□□□□ -1.71
ACLYP53396 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.34□□□□□ -1.71
ACLYP53396 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.34□□□□□ -1.71
ACLYP53396 AC021205.1-201ENST00000468797 348 ntBASIC4.34□□□□□ -1.71
ACLYP53396 CAB39P1-201ENST00000502277 460 ntBASIC4.34□□□□□ -1.71
ACLYP53396 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
ACLYP53396 AC008676.3-201ENST00000521237 435 ntBASIC4.34□□□□□ -1.71
ACLYP53396 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 DEFB109D-201ENST00000529497 240 ntBASIC4.34□□□□□ -1.71
ACLYP53396 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.34□□□□□ -1.71
ACLYP53396 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.34□□□□□ -1.71
ACLYP53396 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 NPM1P47-201ENST00000560843 856 ntBASIC4.34□□□□□ -1.71
ACLYP53396 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.34□□□□□ -1.71
ACLYP53396 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
ACLYP53396 MIR5187-201ENST00000583479 76 ntBASIC4.34□□□□□ -1.71
ACLYP53396 MIR7975-201ENST00000619350 68 ntBASIC4.34□□□□□ -1.71
ACLYP53396 MTND5P1-201ENST00000445440 1375 ntBASIC4.34□□□□□ -1.71
ACLYP53396 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 AC009313.2-201ENST00000417893 1941 ntBASIC4.34□□□□□ -1.71
ACLYP53396 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.34□□□□□ -1.72
ACLYP53396 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ACLYP53396 AC093535.2-201ENST00000624769 2326 ntBASIC4.33□□□□□ -1.72
ACLYP53396 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
ACLYP53396 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.33□□□□□ -1.72
ACLYP53396 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACLYP53396 RNU6-225P-201ENST00000384613 103 ntBASIC4.33□□□□□ -1.72
ACLYP53396 MIR195-201ENST00000385194 87 ntBASIC4.33□□□□□ -1.72
ACLYP53396 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.33□□□□□ -1.72
ACLYP53396 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.33□□□□□ -1.72
ACLYP53396 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC004448.2-201ENST00000422360 586 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.33□□□□□ -1.72
ACLYP53396 MTCO1P45-201ENST00000431457 267 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.33□□□□□ -1.72
ACLYP53396 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 PPIAP3-201ENST00000450588 505 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC007967.1-201ENST00000455422 1159 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC018635.1-201ENST00000468292 1030 ntBASIC4.33□□□□□ -1.72
ACLYP53396 RN7SL271P-201ENST00000487601 295 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.33□□□□□ -1.72
ACLYP53396 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 AC079171.1-201ENST00000568788 914 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.33□□□□□ -1.72
ACLYP53396 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.33□□□□□ -1.72
ACLYP53396 MTCO2P22-201ENST00000603246 681 ntBASIC4.33□□□□□ -1.72
ACLYP53396 ELOCP35-201ENST00000604289 336 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.33□□□□□ -1.72
ACLYP53396 AL442067.2-201ENST00000614033 363 ntBASIC4.33□□□□□ -1.72
ACLYP53396 AC145207.9-201ENST00000623802 325 ntBASIC4.33□□□□□ -1.72
ACLYP53396 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ACLYP53396 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACLYP53396 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACLYP53396 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.33□□□□□ -1.72
ACLYP53396 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACLYP53396 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ACLYP53396 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACLYP53396 SPATA2P1-201ENST00000431223 2055 ntBASIC4.33□□□□□ -1.72
ACLYP53396 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.33□□□□□ -1.72
ACLYP53396 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ACLYP53396 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 AC067945.1-201ENST00000342609 618 ntBASIC4.32□□□□□ -1.72
ACLYP53396 RNU6-670P-201ENST00000364312 104 ntBASIC4.32□□□□□ -1.72
ACLYP53396 RNVU1-14-201ENST00000384770 164 ntBASIC4.32□□□□□ -1.72
ACLYP53396 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ACLYP53396 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 AL139039.2-201ENST00000407436 479 ntBASIC4.32□□□□□ -1.72
ACLYP53396 EIF4EP1-201ENST00000422311 642 ntBASIC4.32□□□□□ -1.72
ACLYP53396 AJ239321.1-201ENST00000424255 564 ntBASIC4.32□□□□□ -1.72
ACLYP53396 AL159987.2-201ENST00000432754 307 ntBASIC4.32□□□□□ -1.72
ACLYP53396 AL353597.2-202ENST00000434901 373 ntBASIC4.32□□□□□ -1.72
ACLYP53396 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.32□□□□□ -1.72
ACLYP53396 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.32□□□□□ -1.72
ACLYP53396 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.32□□□□□ -1.72
ACLYP53396 SEPT14P1-201ENST00000458703 648 ntBASIC4.32□□□□□ -1.72
ACLYP53396 APOOP2-201ENST00000461561 539 ntBASIC4.32□□□□□ -1.72
ACLYP53396 CCDC75P1-201ENST00000469247 791 ntBASIC4.32□□□□□ -1.72
ACLYP53396 WBP1LP4-201ENST00000505043 344 ntBASIC4.32□□□□□ -1.72
ACLYP53396 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
ACLYP53396 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.32□□□□□ -1.72
ACLYP53396 AC037471.2-201ENST00000564941 598 ntBASIC4.32□□□□□ -1.72
ACLYP53396 ZNF415P1-201ENST00000582279 1166 ntBASIC4.32□□□□□ -1.72
ACLYP53396 AC244505.7-201ENST00000599675 272 ntBASIC4.32□□□□□ -1.72
ACLYP53396 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.32□□□□□ -1.72
ACLYP53396 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
ACLYP53396 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACLYP53396 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ACLYP53396 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms