Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-216P-201ENST00000363282 104 ntBASIC5.16□□□□□ -1.58
NEK3P51956 RNA5SP455-201ENST00000365190 119 ntBASIC5.16□□□□□ -1.58
NEK3P51956 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 ENSAP1-201ENST00000392855 326 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC013442.1-201ENST00000397347 228 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AL109941.1-201ENST00000401925 229 ntBASIC5.16□□□□□ -1.58
NEK3P51956 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.16□□□□□ -1.58
NEK3P51956 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.16□□□□□ -1.58
NEK3P51956 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.16□□□□□ -1.58
NEK3P51956 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.16□□□□□ -1.58
NEK3P51956 AL139421.1-201ENST00000423010 169 ntBASIC5.16□□□□□ -1.58
NEK3P51956 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NEK3P51956 MTCYBP11-201ENST00000447254 1109 ntBASIC5.16□□□□□ -1.58
NEK3P51956 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 BX276092.4-201ENST00000452056 248 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC234781.3-201ENST00000452540 973 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.16□□□□□ -1.58
NEK3P51956 ANKRD26P4-201ENST00000455755 950 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC087385.1-201ENST00000475062 312 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC097173.1-201ENST00000505862 819 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.16□□□□□ -1.58
NEK3P51956 AC110775.1-201ENST00000513721 462 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC026407.1-201ENST00000518369 204 ntBASIC5.16□□□□□ -1.58
NEK3P51956 MRPS36P3-201ENST00000519284 130 ntBASIC5.16□□□□□ -1.58
NEK3P51956 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.16□□□□□ -1.58
NEK3P51956 AP001922.4-201ENST00000526967 290 ntBASIC5.16□□□□□ -1.58
NEK3P51956 OR5D15P-201ENST00000531671 942 ntBASIC5.16□□□□□ -1.58
NEK3P51956 LRRC34P1-201ENST00000542742 915 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.16□□□□□ -1.58
NEK3P51956 AL390726.5-202ENST00000564800 256 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC009712.1-201ENST00000564938 316 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC079171.1-201ENST00000568788 914 ntBASIC5.16□□□□□ -1.58
NEK3P51956 SNORD39.3-201ENST00000584451 71 ntBASIC5.16□□□□□ -1.58
NEK3P51956 DUXAP3-201ENST00000603616 594 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AL008729.2-201ENST00000606393 473 ntBASIC5.16□□□□□ -1.58
NEK3P51956 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.16□□□□□ -1.58
NEK3P51956 AC004948.1-201ENST00000609858 672 ntBASIC5.16□□□□□ -1.58
NEK3P51956 TUSC7.1-201ENST00000610969 165 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC009159.2-201ENST00000617603 606 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AP006248.2-201ENST00000623309 592 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AL353662.3-201ENST00000625131 237 ntBASIC5.16□□□□□ -1.58
NEK3P51956 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.16□□□□□ -1.58
NEK3P51956 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.16□□□□□ -1.58
NEK3P51956 MIR1322-201ENST00000638013 71 ntBASIC5.16□□□□□ -1.58
NEK3P51956 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 AL592148.3-201ENST00000608771 2646 ntBASIC5.16□□□□□ -1.58
NEK3P51956 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NEK3P51956 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.58
NEK3P51956 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.15□□□□□ -1.58
NEK3P51956 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.15□□□□□ -1.58
NEK3P51956 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NEK3P51956 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NEK3P51956 RN7SKP113-201ENST00000363891 295 ntBASIC5.15□□□□□ -1.59
NEK3P51956 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NEK3P51956 RNU6-1226P-201ENST00000384317 107 ntBASIC5.15□□□□□ -1.59
NEK3P51956 RNU6-83P-201ENST00000384568 112 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC136624.1-201ENST00000400791 413 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 GJA6P-201ENST00000415117 1042 ntBASIC5.15□□□□□ -1.59
NEK3P51956 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 OR6C64P-201ENST00000419708 825 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AL590762.4-201ENST00000425885 253 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC092447.3-201ENST00000426027 686 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.15□□□□□ -1.59
NEK3P51956 ATP5F1P1-201ENST00000433775 569 ntBASIC5.15□□□□□ -1.59
NEK3P51956 HMGB3P9-201ENST00000441799 583 ntBASIC5.15□□□□□ -1.59
NEK3P51956 MRPL48P1-201ENST00000445390 636 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 HIGD1AP8-201ENST00000453927 274 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.15□□□□□ -1.59
NEK3P51956 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 RN7SKP277-201ENST00000516895 283 ntBASIC5.15□□□□□ -1.59
NEK3P51956 RN7SKP234-201ENST00000517173 224 ntBASIC5.15□□□□□ -1.59
NEK3P51956 RPL23AP53-201ENST00000521854 457 ntBASIC5.15□□□□□ -1.59
NEK3P51956 OR4A45P-201ENST00000529954 901 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.15□□□□□ -1.59
NEK3P51956 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 OR1F2P-201ENST00000570470 933 ntBASIC5.15□□□□□ -1.59
NEK3P51956 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.15□□□□□ -1.59
NEK3P51956 AC010680.4-201ENST00000605334 543 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AP003117.2-201ENST00000606010 545 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 AC091905.4-201ENST00000623432 202 ntBASIC5.15□□□□□ -1.59
NEK3P51956 AC097520.1-201ENST00000624435 385 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms