Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.79□□□□□ -1.8
BRCA2P51587 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 OR5H2-201ENST00000355273 945 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BRCA2P51587 RPL7P36-201ENST00000444633 681 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.79□□□□□ -1.8
BRCA2P51587 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
BRCA2P51587 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 GEMIN8P3-201ENST00000445417 720 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 RPS29P31-201ENST00000446147 164 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 AC239809.1-201ENST00000450470 217 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 ATP5F1P5-201ENST00000526403 760 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.79□□□□□ -1.8
BRCA2P51587 AC106734.1-201ENST00000568646 663 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 AP000255.1-201ENST00000610276 676 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.79□□□□□ -1.8
BRCA2P51587 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.79□□□□□ -1.8
BRCA2P51587 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRCA2P51587 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.79□□□□□ -1.8
BRCA2P51587 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.79□□□□□ -1.8
BRCA2P51587 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.79□□□□□ -1.8
BRCA2P51587 RNU6-579P-201ENST00000516879 102 ntBASIC3.79□□□□□ -1.8
BRCA2P51587 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC3.79□□□□□ -1.8
BRCA2P51587 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BRCA2P51587 AC116096.1-201ENST00000566804 2314 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC3.78□□□□□ -1.8
BRCA2P51587 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.78□□□□□ -1.8
BRCA2P51587 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.78□□□□□ -1.8
BRCA2P51587 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BRCA2P51587 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BRCA2P51587 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.78□□□□□ -1.8
BRCA2P51587 IGLV3-26-201ENST00000520756 302 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 NPM1P5-201ENST00000557228 838 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BRCA2P51587 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRCA2P51587 AP002512.4-202ENST00000641599 4530 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 U3.39-201ENST00000408569 239 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
BRCA2P51587 VN1R40P-201ENST00000455196 941 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 AL133477.1-201ENST00000457472 514 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 AL035404.1-201ENST00000497982 568 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 RNA5SP356-201ENST00000515972 94 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.78□□□□□ -1.8
BRCA2P51587 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
BRCA2P51587 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.78□□□□□ -1.8
BRCA2P51587 AL137918.1-201ENST00000624542 1922 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
BRCA2P51587 AC020656.2-201ENST00000613291 5309 ntBASIC3.78□□□□□ -1.8
BRCA2P51587 AL645568.2-201ENST00000432815 1337 ntBASIC3.78□□□□□ -1.81
BRCA2P51587 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA2P51587 RNU4-47P-201ENST00000410876 114 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AC006028.1-201ENST00000438379 402 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 AC108022.1-201ENST00000493466 478 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AC067852.4-201ENST00000590314 478 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AC022106.2-201ENST00000620114 757 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AP003485.2-201ENST00000623636 610 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AL034408.1-201ENST00000637712 664 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA2P51587 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA2P51587 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA2P51587 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
BRCA2P51587 RNA5SP187-201ENST00000384400 119 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 AC010655.1-201ENST00000449336 292 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 S100A11P1-201ENST00000477525 312 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 SLC25A36P1-201ENST00000590111 465 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AL096803.3-201ENST00000609032 532 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.77□□□□□ -1.81
BRCA2P51587 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA2P51587 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA2P51587 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BRCA2P51587 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.77□□□□□ -1.81
BRCA2P51587 NPM1P48-201ENST00000436002 853 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.77□□□□□ -1.81
BRCA2P51587 AC138938.1-201ENST00000515431 782 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 AC090877.1-201ENST00000561418 344 ntBASIC3.77□□□□□ -1.81
BRCA2P51587 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms