Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 FAM35DP-201ENST00000323387 2712 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 ERCC6-202ENST00000374127 1782 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 AL049737.1-201ENST00000413920 1403 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 MARK2P15-201ENST00000432204 2186 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CR1P49238 SNORA37-201ENST00000384504 129 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 HMGB1P13-201ENST00000406019 642 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 NPM1P34-201ENST00000428821 893 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 RPL7P4-203ENST00000430239 730 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 COX6B1P7-201ENST00000430845 235 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 RPL7P29-201ENST00000437151 728 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CX3CR1P49238 RPS29P33-201ENST00000456717 146 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 SNORD108-201ENST00000459332 71 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 RN7SL738P-201ENST00000470264 297 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 RPL29P14-201ENST00000495837 428 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC093840.1-201ENST00000511599 336 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC018797.3-201ENST00000513388 1241 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 IGKV2-38-201ENST00000517443 247 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.6□□□□□ -1.83
CX3CR1P49238 PSMB7P1-201ENST00000556349 514 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AL161729.3-201ENST00000603533 673 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC104662.1-201ENST00000604448 511 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AL392112.1-201ENST00000605115 829 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AL356218.2-201ENST00000605264 187 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.6□□□□□ -1.83
CX3CR1P49238 AC004825.2-201ENST00000616634 455 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 AC022031.1-201ENST00000585985 2593 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 LINC02471-203ENST00000641941 4752 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CR1P49238 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 BDP1P-201ENST00000582658 1990 ntBASIC3.6□□□□□ -1.83
CX3CR1P49238 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CR1P49238 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CR1P49238 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CR1P49238 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CR1P49238 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 SNORD35B-201ENST00000363660 87 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 RNA5SP509-201ENST00000364577 119 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 MIR153-1-201ENST00000384914 90 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.59□□□□□ -1.83
CX3CR1P49238 RNU2-6P-201ENST00000411404 190 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC01347-201ENST00000417964 355 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC009480.2-201ENST00000422916 432 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC092832.1-201ENST00000422934 400 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AL732292.1-201ENST00000426692 226 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 USP12PY-201ENST00000427677 1064 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 VDAC1P6-201ENST00000430062 855 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 ATP5HP2-201ENST00000433885 485 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 RN7SL303P-201ENST00000469773 251 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC069499.1-201ENST00000489433 509 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC093824.1-201ENST00000508796 343 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 RNU7-143P-201ENST00000516781 65 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC090751.1-201ENST00000566966 267 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms