Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 AL354798.1-201ENST00000622505 329 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 AF001550.2-201ENST00000636643 217 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NEDD4P46934 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD4P46934 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 UBE3AP2-201ENST00000429033 2259 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
NEDD4P46934 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 OR51A6P-201ENST00000418680 1004 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 KCTD9P3-201ENST00000434597 1169 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 AL589765.3-201ENST00000446084 462 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 AL591623.2-201ENST00000449978 222 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 RN7SL323P-201ENST00000494712 295 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 MTCO1P31-201ENST00000506355 492 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 RNA5SP208-201ENST00000516156 78 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.57□□□□□ -1.68
NEDD4P46934 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 AL136370.1-201ENST00000608166 691 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 AC079684.1-201ENST00000621405 437 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.57□□□□□ -1.68
NEDD4P46934 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD4P46934 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD4P46934 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD4P46934 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NEDD4P46934 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.56□□□□□ -1.68
NEDD4P46934 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NEDD4P46934 BMS1P3-201ENST00000372011 932 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.56□□□□□ -1.68
NEDD4P46934 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 OR4F13P-201ENST00000428478 931 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 NPM1P34-201ENST00000428821 893 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.56□□□□□ -1.68
NEDD4P46934 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.56□□□□□ -1.68
NEDD4P46934 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.56□□□□□ -1.68
NEDD4P46934 AL353898.1-201ENST00000444055 238 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 YWHAQP9-201ENST00000445891 512 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.56□□□□□ -1.68
NEDD4P46934 RPL23AP71-201ENST00000470966 469 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.56□□□□□ -1.68
NEDD4P46934 RAC1P2-201ENST00000511164 579 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC026726.1-201ENST00000512859 601 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 NPM1P41-201ENST00000512920 831 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 MTCYBP19-201ENST00000517463 1124 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC007991.1-201ENST00000522680 631 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.56□□□□□ -1.68
NEDD4P46934 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.56□□□□□ -1.68
NEDD4P46934 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.56□□□□□ -1.68
NEDD4P46934 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.56□□□□□ -1.68
NEDD4P46934 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.56□□□□□ -1.68
NEDD4P46934 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC098483.2-201ENST00000603158 454 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AL390816.3-201ENST00000604527 1066 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC135178.6-201ENST00000605314 398 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AL109618.2-201ENST00000605527 211 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 AC004775.1-201ENST00000607389 753 ntBASIC4.56□□□□□ -1.68
NEDD4P46934 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD4P46934 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.56□□□□□ -1.68
NEDD4P46934 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEDD4P46934 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEDD4P46934 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
NEDD4P46934 BDP1P-201ENST00000582658 1990 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
NEDD4P46934 RAD1P1-201ENST00000231383 813 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 RNA5SP322-201ENST00000363617 119 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 MIR30B-201ENST00000384850 88 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 SOD2P1-201ENST00000396543 562 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 RPL26P37-201ENST00000411983 438 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 TCEA1P4-201ENST00000415066 844 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 RPL7P2-201ENST00000427639 268 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC087650.1-201ENST00000431445 468 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.55□□□□□ -1.68
NEDD4P46934 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.55□□□□□ -1.68
NEDD4P46934 CALM1P2-201ENST00000452941 448 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms