Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-115P-201ENST00000364310 107 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-1P43699 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 DSTNP4-201ENST00000399472 474 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AL078604.1-201ENST00000404609 466 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NKX2-1P43699 RNU2-21P-201ENST00000410368 188 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 NUP35P2-201ENST00000416748 943 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC005005.2-201ENST00000420779 380 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 Z74021.1-201ENST00000423610 407 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC234779.1-201ENST00000425910 285 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 HIGD1AP12-201ENST00000427832 281 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 IFNNP1-201ENST00000429219 553 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC010881.1-201ENST00000433830 235 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC093414.1-201ENST00000434712 514 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 USP9YP22-201ENST00000438971 294 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AL645937.3-201ENST00000453647 936 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC009127.1-201ENST00000467090 155 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 RN7SL174P-201ENST00000475578 289 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC012158.1-204ENST00000483430 465 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 DYNLL1P6-201ENST00000503440 264 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 KLRA1P-201ENST00000503499 986 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 SNX5P1-201ENST00000505757 1041 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC113430.1-201ENST00000506872 718 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 RNA5SP362-201ENST00000516048 118 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 RNA5SP392-201ENST00000516905 112 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 IGKV3D-34-201ENST00000522638 302 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC124068.1-201ENST00000563131 678 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AP001269.3-201ENST00000588718 329 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC105254.2-201ENST00000603636 436 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AC024257.5-201ENST00000612739 531 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.9□□□□□ -1.79
NKX2-1P43699 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-1P43699 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 AL023881.1-201ENST00000621088 301 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 AC079416.3-201ENST00000624479 549 ntBASIC3.9□□□□□ -1.79
NKX2-1P43699 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
NKX2-1P43699 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-1P43699 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-1P43699 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC017104.4-201ENST00000636283 1592 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NKX2-1P43699 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NKX2-1P43699 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 ZNF33CP-201ENST00000432492 2030 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 RNA5SP183-201ENST00000362452 119 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RNU1-108P-201ENST00000362556 161 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RN7SKP160-201ENST00000363804 340 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RNA5SP28-201ENST00000363841 119 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RNU6-560P-201ENST00000364007 108 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 snoZ40.1-201ENST00000364540 72 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 RNU6-413P-201ENST00000384115 107 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 SNORD116-23-201ENST00000384645 92 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RNU6-1242P-201ENST00000391052 103 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AL357515.1-201ENST00000402967 542 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 MTCO3P31-201ENST00000405526 789 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RPS3AP9-201ENST00000417027 792 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 EIF4EP1-201ENST00000422311 642 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 RPL7L1P9-201ENST00000431298 745 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC241584.1-201ENST00000438469 1241 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC092393.1-201ENST00000439625 742 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 MTATP6P26-201ENST00000445926 662 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 KNOP1P3-201ENST00000446933 426 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC000111.2-201ENST00000448200 210 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms