Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.24□□□□□ -1.73
APOBEC1P41238 OR56B2P-201ENST00000317102 954 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 RNU6-560P-201ENST00000364007 108 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
APOBEC1P41238 SNORD65.1-201ENST00000390889 71 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 MIR298-201ENST00000401212 88 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 MTND4P13-201ENST00000402078 1023 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.24□□□□□ -1.73
APOBEC1P41238 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AL008987.1-201ENST00000415528 237 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC140479.3-201ENST00000418944 1126 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 OR6C64P-201ENST00000419708 825 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC004074.1-201ENST00000421810 1063 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AL590762.4-201ENST00000425885 253 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL031736.2-201ENST00000426573 787 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AL353597.2-202ENST00000434901 373 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 NPM1P33-201ENST00000438918 872 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 Z77249.1-201ENST00000444622 1175 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC1P41238 RPL7P59-201ENST00000447700 943 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 PNPLA4P1-201ENST00000458328 305 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.24□□□□□ -1.73
APOBEC1P41238 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC108734.3-201ENST00000481241 1165 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 RN7SL591P-201ENST00000496150 292 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC109471.1-201ENST00000511631 612 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 RNU5A-4P-201ENST00000516588 111 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AP001207.1-201ENST00000524051 481 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 MTATP6P15-201ENST00000527233 835 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 OR4A2P-201ENST00000527276 913 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 NBEAP1-201ENST00000554452 979 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC018552.3-201ENST00000567416 561 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC110743.1-201ENST00000584870 478 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 NF1P5-201ENST00000588287 448 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC097478.2-201ENST00000610572 514 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 AC105227.2-201ENST00000615075 605 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 MIR6853-201ENST00000619642 74 ntBASIC4.24□□□□□ -1.73
APOBEC1P41238 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
APOBEC1P41238 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOBEC1P41238 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC021242.1-201ENST00000507315 2035 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 SNORA58B-201ENST00000364259 136 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 MIR217-201ENST00000384817 110 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 PRELID3BP11-201ENST00000414230 479 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 MRPS36P1-201ENST00000421291 307 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 FABP7P1-201ENST00000424004 391 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.23□□□□□ -1.73
APOBEC1P41238 Z93242.1-201ENST00000427102 353 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 USP9YP31-201ENST00000431405 881 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 COX7BP2-201ENST00000437976 242 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 EEF1A1P1-201ENST00000447052 739 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.23□□□□□ -1.73
APOBEC1P41238 RPL5P22-201ENST00000480199 884 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 MTND2P14-201ENST00000482139 351 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC083982.1-201ENST00000485679 344 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 UBA52P3-201ENST00000491303 382 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.23□□□□□ -1.73
APOBEC1P41238 FABP5P12-201ENST00000515543 389 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 RNU2-30P-201ENST00000516209 141 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 RN7SKP96-201ENST00000516948 297 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC1P41238 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms