Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DMAP28067 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DMAP28067 LIPT1P1-201ENST00000415870 1186 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC104837.2-201ENST00000427236 424 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC011998.1-201ENST00000433403 117 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 TXNP1-201ENST00000441872 371 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 FCF1P7-201ENST00000451185 558 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 NANOGP10-201ENST00000453325 895 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 RPS3AP41-201ENST00000462701 778 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC092324.1-201ENST00000468671 324 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC093824.1-201ENST00000508796 343 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 PCBP2P3-201ENST00000509726 843 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC005921.1-201ENST00000510589 286 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 RNA5SP519-201ENST00000516480 119 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 TRAV11-201ENST00000539512 339 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 RN7SL690P-201ENST00000582087 240 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC112503.1-201ENST00000608436 391 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AL450489.1-201ENST00000612071 468 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC022079.2-201ENST00000619739 566 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AL139089.1-201ENST00000620372 975 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 AC019080.5-201ENST00000624891 757 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 OR6C71P-202ENST00000641886 1107 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DMAP28067 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DMAP28067 SEPT7P7-201ENST00000420492 1301 ntBASIC3.44□□□□□ -1.86
HLA-DMAP28067 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 USP8P1-201ENST00000494673 3183 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AP001148.1-201ENST00000624124 2359 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 RNU1-14P-201ENST00000362759 152 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 RNU6-317P-201ENST00000384031 107 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 HMGB1P13-201ENST00000406019 642 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 NRBF2P2-201ENST00000413087 861 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC008065.1-201ENST00000428525 348 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC023347.2-201ENST00000433994 462 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 ELOCP11-201ENST00000436690 332 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 ELOCP16-201ENST00000444494 332 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 PHBP16-201ENST00000446318 950 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 RPS20P32-201ENST00000456044 356 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC146507.1-201ENST00000468335 354 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 CYCSP20-201ENST00000473154 315 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC078785.3-201ENST00000476607 425 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 RN7SL481P-201ENST00000477764 299 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 RPL29P14-201ENST00000495837 428 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC147055.1-201ENST00000509261 750 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC021146.7-201ENST00000509604 775 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 KRT19P6-201ENST00000510983 209 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 PCNPP1-201ENST00000552501 511 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC022655.2-201ENST00000577280 318 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 MIR4646-201ENST00000580775 63 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 NPM1P45-201ENST00000583151 559 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC115286.1-201ENST00000604298 434 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 AL592436.1-201ENST00000605135 558 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC012409.3-201ENST00000611343 981 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DMAP28067 AC109780.1-201ENST00000451768 1344 ntBASIC3.43□□□□□ -1.86
HLA-DMAP28067 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC006042.3-201ENST00000454684 1469 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 RAD1P1-201ENST00000231383 813 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms