Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH3P22223 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH3P22223 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDH3P22223 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH3P22223 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CDH3P22223 AC025031.4-201ENST00000621248 3271 ntBASIC4.38□□□□□ -1.71
CDH3P22223 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 AC100871.1-201ENST00000507871 1456 ntBASIC4.38□□□□□ -1.71
CDH3P22223 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CDH3P22223 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH3P22223 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH3P22223 RNU5B-4P-201ENST00000363508 111 ntBASIC4.38□□□□□ -1.71
CDH3P22223 SNORA62.2-201ENST00000364672 152 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC234772.1-201ENST00000377927 937 ntBASIC4.38□□□□□ -1.71
CDH3P22223 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH3P22223 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC241520.1-201ENST00000422654 1099 ntBASIC4.38□□□□□ -1.71
CDH3P22223 RPL18P10-201ENST00000425606 538 ntBASIC4.38□□□□□ -1.71
CDH3P22223 C4BPAP2-201ENST00000428434 478 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH3P22223 MED6P1-201ENST00000439659 713 ntBASIC4.38□□□□□ -1.71
CDH3P22223 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDH3P22223 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH3P22223 TVP23BP2-201ENST00000455082 615 ntBASIC4.38□□□□□ -1.71
CDH3P22223 RPL23AP65-201ENST00000475608 468 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH3P22223 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH3P22223 AC093840.1-201ENST00000511599 336 ntBASIC4.38□□□□□ -1.71
CDH3P22223 IGLVIV-65-201ENST00000517313 360 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC034205.1-201ENST00000520621 638 ntBASIC4.38□□□□□ -1.71
CDH3P22223 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH3P22223 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH3P22223 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH3P22223 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH3P22223 AL139286.1-201ENST00000604465 483 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
CDH3P22223 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH3P22223 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH3P22223 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH3P22223 AC016597.2-201ENST00000613256 341 ntBASIC4.38□□□□□ -1.71
CDH3P22223 AC073569.3-201ENST00000619055 682 ntBASIC4.38□□□□□ -1.71
CDH3P22223 SAGE2P-201ENST00000420011 2126 ntBASIC4.37□□□□□ -1.71
CDH3P22223 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.37□□□□□ -1.71
CDH3P22223 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH3P22223 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH3P22223 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 RNU6-543P-201ENST00000362576 108 ntBASIC4.37□□□□□ -1.71
CDH3P22223 RNA5SP27-201ENST00000363839 119 ntBASIC4.37□□□□□ -1.71
CDH3P22223 RNU6-98P-201ENST00000384173 107 ntBASIC4.37□□□□□ -1.71
CDH3P22223 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH3P22223 AC096533.1-201ENST00000411645 353 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH3P22223 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH3P22223 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 TCEA1P2-201ENST00000420496 906 ntBASIC4.37□□□□□ -1.71
CDH3P22223 NIPA2P1-201ENST00000426223 976 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC093422.3-201ENST00000428506 305 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC011998.1-201ENST00000433403 117 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC011242.1-201ENST00000433596 1158 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH3P22223 AC000041.1-201ENST00000439655 175 ntBASIC4.37□□□□□ -1.71
CDH3P22223 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 ARL5AP2-201ENST00000444698 533 ntBASIC4.37□□□□□ -1.71
CDH3P22223 GTF2IP12-201ENST00000456547 356 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC104982.1-201ENST00000478775 574 ntBASIC4.37□□□□□ -1.71
CDH3P22223 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH3P22223 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH3P22223 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH3P22223 IGLV3-26-201ENST00000520756 302 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH3P22223 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CDH3P22223 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 AP000919.1-202ENST00000581139 1264 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC083899.3-201ENST00000603413 594 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC005191.1-201ENST00000603950 358 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AL356218.2-201ENST00000605264 187 ntBASIC4.37□□□□□ -1.71
CDH3P22223 AC099785.1-201ENST00000605697 437 ntBASIC4.37□□□□□ -1.71
CDH3P22223 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH3P22223 MIR6798-201ENST00000612887 67 ntBASIC4.37□□□□□ -1.71
CDH3P22223 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH3P22223 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms