Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A1P20908 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.6□□□□□ -1.83
COL5A1P20908 DPY19L1P2-201ENST00000426647 915 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.6□□□□□ -1.83
COL5A1P20908 APOOP2-201ENST00000461561 539 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AL136126.1-201ENST00000473603 402 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AC109458.1-201ENST00000508858 316 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 HIGD1AP18-201ENST00000520730 278 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.6□□□□□ -1.83
COL5A1P20908 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL5A1P20908 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 AC017007.4-201ENST00000503353 1352 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL5A1P20908 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A1P20908 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 AL078595.2-201ENST00000605309 1780 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 RNU6-673P-201ENST00000365084 104 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AC017078.1-201ENST00000416146 368 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC005300.1-201ENST00000428401 373 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AC069285.2-201ENST00000440210 275 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 MRPL35P4-201ENST00000453682 566 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 AC084198.1-201ENST00000477747 402 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 RN7SL809P-201ENST00000482040 297 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 AC108941.1-201ENST00000502853 530 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A1P20908 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.6□□□□□ -1.83
COL5A1P20908 AP000553.6-201ENST00000641242 118 ntBASIC3.6□□□□□ -1.83
COL5A1P20908 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A1P20908 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.59□□□□□ -1.83
COL5A1P20908 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL5A1P20908 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL5A1P20908 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
COL5A1P20908 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL5A1P20908 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL5A1P20908 RPL7P60-201ENST00000397636 735 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 RPL7P44-201ENST00000424827 742 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 AL512649.1-201ENST00000428997 581 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.59□□□□□ -1.83
COL5A1P20908 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
COL5A1P20908 RPL7P23-201ENST00000493874 747 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.59□□□□□ -1.83
COL5A1P20908 AC004069.2-201ENST00000505438 1114 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.59□□□□□ -1.83
COL5A1P20908 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.59□□□□□ -1.83
COL5A1P20908 AL139395.1-201ENST00000603662 160 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 AC133552.5-201ENST00000604266 540 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.59□□□□□ -1.83
COL5A1P20908 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.59□□□□□ -1.83
COL5A1P20908 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL5A1P20908 AC139426.3-201ENST00000605648 2059 ntBASIC3.59□□□□□ -1.83
COL5A1P20908 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL5A1P20908 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.59□□□□□ -1.84
COL5A1P20908 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL5A1P20908 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL5A1P20908 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL5A1P20908 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL5A1P20908 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 OR6K3-202ENST00000368146 996 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 MIR93-201ENST00000385024 80 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 OR51A6P-201ENST00000418680 1004 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 NANOGP6-201ENST00000429190 847 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.58□□□□□ -1.84
COL5A1P20908 RPL12P46-201ENST00000436610 195 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.58□□□□□ -1.84
COL5A1P20908 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 RN7SL807P-201ENST00000470923 297 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 RN7SL429P-201ENST00000479090 223 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 RN7SL489P-201ENST00000486185 223 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 RN7SL327P-201ENST00000488659 223 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 RPL5P23-201ENST00000496040 868 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.58□□□□□ -1.84
COL5A1P20908 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 RAC1P2-201ENST00000511164 579 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.58□□□□□ -1.84
COL5A1P20908 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 AC006960.3-201ENST00000561845 705 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 SNORA62.6-201ENST00000606322 83 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AC128687.2-201ENST00000609657 566 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 RN7SL853P-201ENST00000617250 223 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms