Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC139713.2-214ENST00000642059 1811 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AL133412.1-201ENST00000380194 2992 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC016716.1-201ENST00000265882 708 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 RNA5SP28-201ENST00000363841 119 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 VN1R8P-201ENST00000407739 893 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 RPL23AP15-201ENST00000450202 459 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC233982.1-201ENST00000451247 436 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 RPL7P32-201ENST00000457119 744 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 RPS26P28-201ENST00000470806 348 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 NDUFA5P9-201ENST00000472609 340 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 STMN1P2-201ENST00000508435 439 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC002456.2-201ENST00000509356 380 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC008885.2-201ENST00000509506 930 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 Vault.1-201ENST00000516474 102 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC034205.1-201ENST00000520621 638 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 MIR4277-201ENST00000578298 84 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 MIR378J-201ENST00000611988 109 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC007546.1-201ENST00000619452 559 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC006065.5-201ENST00000623427 349 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC067931.1-201ENST00000624190 671 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC092608.3-201ENST00000625017 386 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC055839.1-201ENST00000634467 498 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 MIR4496-201ENST00000635896 61 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 AC083899.2-201ENST00000423285 1376 ntBASIC4.37□□□□□ -1.71
HLA-DPA1P20036 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPA1P20036 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 RNU6-356P-201ENST00000384140 107 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 RPL23AP48-201ENST00000406913 488 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 SNORA11C-201ENST00000408532 129 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 RNA5SP146-201ENST00000410743 123 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 RNU4-27P-201ENST00000410889 139 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 USP9YP7-201ENST00000436723 430 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 FABP5P3-201ENST00000437960 408 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC009263.1-201ENST00000441193 1239 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 EIF2S2P2-201ENST00000447161 982 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 BX276092.4-201ENST00000452056 248 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 USP9YP32-201ENST00000452432 430 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 RPL23AP24-201ENST00000458203 385 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 PTGES3P3-201ENST00000511479 482 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 OR8G5-201ENST00000524943 1041 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC091488.1-201ENST00000604239 660 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL356218.2-201ENST00000605264 187 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC096586.1-201ENST00000610267 561 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL121873.1-201ENST00000616013 524 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC008432.1-201ENST00000615912 1320 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 MFSD8-213ENST00000641134 1327 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 NOL8P1-201ENST00000508336 3529 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DPA1P20036 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
HLA-DPA1P20036 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms