| TFE3 | P19532 | AL513550.1-201 | ENST00000418945 | 1638 nt | TSL 2 BASIC | 6.02 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LRRC77P-206 | ENST00000481578 | 2350 nt | TSL 1 (best) BASIC | 6.02 | □□□□□ -1.45 | | |
| TFE3 | P19532 | DTNA-227 | ENST00000597599 | 1869 nt | APPRIS ALT2 TSL 2 BASIC | 6.02 | □□□□□ -1.45 | | |
| TFE3 | P19532 | TPTE2P2-202 | ENST00000605924 | 2113 nt | TSL 5 BASIC | 6.02 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ARHGAP20-206 | ENST00000533353 | 6066 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.02 | □□□□□ -1.45 | | |
| TFE3 | P19532 | TPTE2-201 | ENST00000255310 | 1562 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | HSPA13-201 | ENST00000285667 | 3986 nt | APPRIS P1 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ARHGEF12-213 | ENST00000532993 | 8753 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC091045.1-201 | ENST00000561460 | 2277 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | CHMP1B2P-202 | ENST00000614414 | 6813 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | POSTN-204 | ENST00000379749 | 3210 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | OPRM1-206 | ENST00000419506 | 1402 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AP002907.1-201 | ENST00000606361 | 1430 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC00707-201 | ENST00000436383 | 3070 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MTERF1-203 | ENST00000419292 | 3882 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ZNF337-AS1-201 | ENST00000414393 | 4666 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MPP5-204 | ENST00000555925 | 5006 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | GNG5P1-201 | ENST00000255500 | 204 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RPL23AP57-201 | ENST00000332361 | 466 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | KRTAP23-1-201 | ENST00000334160 | 211 nt | APPRIS P1 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU1-85P-201 | ENST00000364127 | 164 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | Y_RNA.813-201 | ENST00000364639 | 102 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU2-8P-201 | ENST00000410727 | 190 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL133384.1-201 | ENST00000412744 | 351 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC016710.1-201 | ENST00000421326 | 466 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC013402.2-201 | ENST00000424257 | 437 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC01707-201 | ENST00000425517 | 627 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ISCA1P6-201 | ENST00000427740 | 390 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RPL12P16-201 | ENST00000431098 | 498 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | CA1-201 | ENST00000431316 | 1232 nt | APPRIS P1 TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | CBX1P1-201 | ENST00000440184 | 427 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC073109.1-201 | ENST00000445066 | 978 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC079448.1-201 | ENST00000449377 | 373 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AMD1P1-201 | ENST00000457220 | 922 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC00430-201 | ENST00000457672 | 597 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC117513.1-201 | ENST00000462792 | 766 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC094085.1-201 | ENST00000468914 | 584 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | GPX5-203 | ENST00000469384 | 428 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RPS17P15-201 | ENST00000475609 | 349 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RBM43P1-201 | ENST00000476891 | 1081 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MTND1P3-201 | ENST00000484956 | 952 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RPL35P6-201 | ENST00000490024 | 372 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | DUTP1-201 | ENST00000493631 | 470 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | OR5H5P-201 | ENST00000503164 | 928 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | TMEM251P1-201 | ENST00000503717 | 318 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC025465.4-201 | ENST00000513422 | 638 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC034159.1-201 | ENST00000513885 | 583 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MTND1P35-201 | ENST00000526739 | 508 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC02546-202 | ENST00000528119 | 801 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ANAPC15-205 | ENST00000535503 | 734 nt | APPRIS P3 TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC008127.2-201 | ENST00000549925 | 1075 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL512360.1-201 | ENST00000555346 | 234 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC068714.1-201 | ENST00000559623 | 800 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL845331.3-202 | ENST00000562856 | 261 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC034268.2-201 | ENST00000571784 | 482 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | U95743.1-201 | ENST00000573369 | 1001 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | NUFIP2-202 | ENST00000579665 | 559 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC018761.4-201 | ENST00000585742 | 272 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC011509.1-201 | ENST00000589512 | 164 nt | TSL 3 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | DARS-AS1-217 | ENST00000599279 | 544 nt | TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU4-89P-201 | ENST00000607443 | 133 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | GTF2IP4-201 | ENST00000453092 | 2054 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MID1-209 | ENST00000453318 | 6393 nt | APPRIS P1 TSL 5 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | PROM1-201 | ENST00000447510 | 3977 nt | APPRIS P3 TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ZMYM6-201 | ENST00000317538 | 2702 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | SMG1P7-201 | ENST00000565246 | 2704 nt | BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ZNF227-208 | ENST00000589005 | 2943 nt | TSL 2 BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RAD17-201 | ENST00000282891 | 2135 nt | TSL 1 (best) BASIC | 6.01 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL606516.1-201 | ENST00000455438 | 1861 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | CASC15-206 | ENST00000606851 | 1889 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | DSC2-201 | ENST00000251081 | 4826 nt | TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC02019-201 | ENST00000608605 | 2060 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | ZNF850-202 | ENST00000591344 | 7714 nt | APPRIS P3 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MTO1-212 | ENST00000498286 | 10857 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | PTPRR-204 | ENST00000440835 | 2818 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MAPK10-370 | ENST00000641943 | 4117 nt | APPRIS P2 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | GLYATL1-202 | ENST00000317391 | 1627 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | KBTBD3-201 | ENST00000526793 | 3751 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | STK3-216 | ENST00000523601 | 3107 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | SLC16A6-201 | ENST00000327268 | 3807 nt | APPRIS P1 TSL 1 (best) BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | OR6K2-201 | ENST00000359610 | 975 nt | APPRIS P1 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU6-1011P-201 | ENST00000384668 | 107 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | MIR130A-201 | ENST00000385274 | 89 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL589642.2-201 | ENST00000413291 | 839 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | SLC8A1-AS1-201 | ENST00000413479 | 800 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RPL21P111-201 | ENST00000418453 | 477 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL078581.1-201 | ENST00000419134 | 340 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | LINC01074-201 | ENST00000422527 | 555 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | SETP9-201 | ENST00000423837 | 832 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC104170.2-201 | ENST00000424246 | 678 nt | TSL 3 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RWDD4P2-201 | ENST00000426392 | 563 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | CRIP1P1-201 | ENST00000427567 | 185 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AP001117.1-201 | ENST00000428205 | 609 nt | TSL 2 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RSU1P2-202 | ENST00000437884 | 485 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AL360091.2-201 | ENST00000446847 | 650 nt | TSL 5 BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC144530.1-201 | ENST00000452862 | 555 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU6-1218P-201 | ENST00000458990 | 108 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | RNU1-88P-201 | ENST00000459274 | 128 nt | BASIC | 6 | □□□□□ -1.45 | | |
| TFE3 | P19532 | AC087312.1-201 | ENST00000471411 | 480 nt | BASIC | 6 | □□□□□ -1.45 | | |