Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 FTH1P21-201ENST00000512179 511 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.43□□□□□ -1.54
ATF4P18848 NDUFA3P2-201ENST00000531434 232 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 CR383656.7-201ENST00000548164 174 ntBASIC5.43□□□□□ -1.54
ATF4P18848 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 AL591767.3-201ENST00000554632 525 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AL359212.1-201ENST00000556608 614 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AP005205.1-201ENST00000563503 508 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 AC024614.1-201ENST00000577546 307 ntBASIC5.43□□□□□ -1.54
ATF4P18848 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 AC008752.3-201ENST00000588113 712 ntBASIC5.43□□□□□ -1.54
ATF4P18848 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.43□□□□□ -1.54
ATF4P18848 AL162413.1-201ENST00000603198 110 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC063962.1-201ENST00000608199 521 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC245517.5-201ENST00000611529 162 ntBASIC5.43□□□□□ -1.54
ATF4P18848 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.43□□□□□ -1.54
ATF4P18848 FRG2MP-201ENST00000613317 856 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 AC078909.2-201ENST00000620584 398 ntBASIC5.43□□□□□ -1.54
ATF4P18848 AC120057.5-201ENST00000623840 154 ntBASIC5.43□□□□□ -1.54
ATF4P18848 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.43□□□□□ -1.54
ATF4P18848 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 PCAT14-202ENST00000627127 3935 ntBASIC5.43□□□□□ -1.54
ATF4P18848 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATF4P18848 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATF4P18848 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATF4P18848 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
ATF4P18848 AC026951.1-201ENST00000559530 2459 ntBASIC5.42□□□□□ -1.54
ATF4P18848 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 AC010928.1-201ENST00000592477 1447 ntBASIC5.42□□□□□ -1.54
ATF4P18848 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 AL591135.1-201ENST00000401578 5914 ntBASIC5.42□□□□□ -1.54
ATF4P18848 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ATF4P18848 Y_RNA.159-201ENST00000363674 87 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RNA5SP172-201ENST00000365061 118 ntBASIC5.42□□□□□ -1.54
ATF4P18848 ZNF37CP-201ENST00000406795 241 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RNU2-47P-201ENST00000410649 186 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL109913.1-201ENST00000421173 514 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RGS17P1-201ENST00000423358 553 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC009362.1-201ENST00000427253 406 ntBASIC5.42□□□□□ -1.54
ATF4P18848 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ATF4P18848 RPL7P54-201ENST00000438336 674 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.42□□□□□ -1.54
ATF4P18848 DPPA3P1-201ENST00000448050 469 ntBASIC5.42□□□□□ -1.54
ATF4P18848 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 OR7E7P-201ENST00000455678 1012 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RPSAP7-201ENST00000456871 885 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL049714.1-201ENST00000466686 347 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RN7SL188P-201ENST00000469842 285 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 AL079303.1-201ENST00000486611 463 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL035690.1-201ENST00000490892 383 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC017037.2-201ENST00000513850 890 ntBASIC5.42□□□□□ -1.54
ATF4P18848 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.42□□□□□ -1.54
ATF4P18848 RNU6-798P-201ENST00000516912 103 ntBASIC5.42□□□□□ -1.54
ATF4P18848 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.42□□□□□ -1.54
ATF4P18848 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.42□□□□□ -1.54
ATF4P18848 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 LLPHP1-201ENST00000603571 367 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC007621.1-201ENST00000604544 437 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.42□□□□□ -1.54
ATF4P18848 Z84480.1-201ENST00000605131 311 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AL445222.1-201ENST00000607259 628 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
ATF4P18848 MIR6774-201ENST00000614651 70 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.42□□□□□ -1.54
ATF4P18848 AC103564.3-201ENST00000621194 220 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC099494.2-201ENST00000623371 978 ntBASIC5.42□□□□□ -1.54
ATF4P18848 AC005609.4-201ENST00000625071 447 ntBASIC5.42□□□□□ -1.54
ATF4P18848 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.42□□□□□ -1.54
ATF4P18848 AC073488.7-201ENST00000633785 778 ntBASIC5.42□□□□□ -1.54
ATF4P18848 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATF4P18848 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms