Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RB1P06400 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RB1P06400 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RB1P06400 MIR331-201ENST00000362302 94 ntBASIC4.77□□□□□ -1.65
RB1P06400 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 RNU6-146P-201ENST00000384602 108 ntBASIC4.77□□□□□ -1.65
RB1P06400 RSL24D1P1-201ENST00000404972 493 ntBASIC4.77□□□□□ -1.65
RB1P06400 MRPL48P1-201ENST00000445390 636 ntBASIC4.77□□□□□ -1.65
RB1P06400 AL050341.1-201ENST00000447743 313 ntBASIC4.77□□□□□ -1.65
RB1P06400 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.77□□□□□ -1.65
RB1P06400 AC239809.1-201ENST00000450470 217 ntBASIC4.77□□□□□ -1.65
RB1P06400 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.77□□□□□ -1.65
RB1P06400 RPL35P6-201ENST00000490024 372 ntBASIC4.77□□□□□ -1.65
RB1P06400 CAB39P1-201ENST00000502277 460 ntBASIC4.77□□□□□ -1.65
RB1P06400 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.77□□□□□ -1.65
RB1P06400 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.77□□□□□ -1.65
RB1P06400 SMARCE1P4-201ENST00000523647 241 ntBASIC4.77□□□□□ -1.65
RB1P06400 TRAV8-5-201ENST00000537369 341 ntBASIC4.77□□□□□ -1.65
RB1P06400 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.77□□□□□ -1.65
RB1P06400 MIR3158-1-201ENST00000583596 81 ntBASIC4.77□□□□□ -1.65
RB1P06400 VN1R87P-201ENST00000596706 487 ntBASIC4.77□□□□□ -1.65
RB1P06400 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.77□□□□□ -1.65
RB1P06400 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.77□□□□□ -1.65
RB1P06400 AC020634.1-201ENST00000608701 549 ntBASIC4.77□□□□□ -1.65
RB1P06400 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.77□□□□□ -1.65
RB1P06400 AC023509.5-201ENST00000617434 807 ntBASIC4.77□□□□□ -1.65
RB1P06400 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.77□□□□□ -1.65
RB1P06400 AC092608.3-201ENST00000625017 386 ntBASIC4.77□□□□□ -1.65
RB1P06400 AC017104.5-201ENST00000637647 639 ntBASIC4.77□□□□□ -1.65
RB1P06400 AC099654.8-201ENST00000637757 681 ntBASIC4.77□□□□□ -1.65
RB1P06400 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 CYP1D1P-201ENST00000416662 1433 ntBASIC4.77□□□□□ -1.65
RB1P06400 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
RB1P06400 AC022031.1-201ENST00000585985 2593 ntBASIC4.77□□□□□ -1.65
RB1P06400 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.77□□□□□ -1.65
RB1P06400 MAPK10-349ENST00000641767 3661 ntBASIC4.77□□□□□ -1.65
RB1P06400 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 LINC01109-201ENST00000603837 3081 ntBASIC4.76□□□□□ -1.65
RB1P06400 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RB1P06400 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.76□□□□□ -1.65
RB1P06400 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RB1P06400 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RB1P06400 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
RB1P06400 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
RB1P06400 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RB1P06400 RNA5SP171-201ENST00000391071 115 ntBASIC4.76□□□□□ -1.65
RB1P06400 ATP5F1P3-201ENST00000397213 657 ntBASIC4.76□□□□□ -1.65
RB1P06400 SNORA11C-201ENST00000408532 129 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC114814.2-201ENST00000419195 485 ntBASIC4.76□□□□□ -1.65
RB1P06400 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RB1P06400 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.76□□□□□ -1.65
RB1P06400 RPS26P30-201ENST00000443431 335 ntBASIC4.76□□□□□ -1.65
RB1P06400 TDGF1P1-201ENST00000445734 527 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC104651.2-201ENST00000447549 528 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC012671.1-201ENST00000451912 203 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
RB1P06400 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.76□□□□□ -1.65
RB1P06400 MTND4LP31-201ENST00000514859 294 ntBASIC4.76□□□□□ -1.65
RB1P06400 PRELID3BP4-201ENST00000515476 571 ntBASIC4.76□□□□□ -1.65
RB1P06400 RNA5SP360-201ENST00000516555 118 ntBASIC4.76□□□□□ -1.65
RB1P06400 RN7SKP283-201ENST00000517197 270 ntBASIC4.76□□□□□ -1.65
RB1P06400 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.76□□□□□ -1.65
RB1P06400 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 HMGB3P26-201ENST00000560051 582 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC079587.1-201ENST00000603846 277 ntBASIC4.76□□□□□ -1.65
RB1P06400 BNIP3P4-201ENST00000604946 565 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC018754.1-201ENST00000607486 925 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC104763.3-201ENST00000613765 618 ntBASIC4.76□□□□□ -1.65
RB1P06400 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.76□□□□□ -1.65
RB1P06400 AC013437.2-201ENST00000639587 677 ntBASIC4.76□□□□□ -1.65
RB1P06400 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RB1P06400 AC134882.1-201ENST00000603738 1676 ntBASIC4.76□□□□□ -1.65
RB1P06400 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.76□□□□□ -1.65
RB1P06400 MTCO1P6-201ENST00000481192 1384 ntBASIC4.76□□□□□ -1.65
RB1P06400 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RB1P06400 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 AL645568.2-201ENST00000432815 1337 ntBASIC4.75□□□□□ -1.65
RB1P06400 USP9YP4-201ENST00000424401 1745 ntBASIC4.75□□□□□ -1.65
RB1P06400 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 OR52B1P-201ENST00000316506 909 ntBASIC4.75□□□□□ -1.65
RB1P06400 UBBP2-201ENST00000376781 231 ntBASIC4.75□□□□□ -1.65
RB1P06400 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 MIR525-201ENST00000384978 85 ntBASIC4.75□□□□□ -1.65
RB1P06400 MIR122-201ENST00000385044 85 ntBASIC4.75□□□□□ -1.65
RB1P06400 TCEA1P2-201ENST00000420496 906 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC006946.1-201ENST00000429106 328 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms