Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 AC068769.1-201ENST00000474767 2426 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 RNU6-97P-201ENST00000363387 104 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 Y_RNA.138-201ENST00000363462 102 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 SNORA38B-201ENST00000363524 131 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 RN7SKP6-201ENST00000364795 319 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 MRPS6P2-201ENST00000381143 370 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 RN7SKP62-201ENST00000384539 329 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 U3.20-201ENST00000390909 217 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC073136.2-201ENST00000417282 849 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 PLGLA-201ENST00000465668 449 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 SLC25A51P1-201ENST00000468432 871 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 AC055855.1-201ENST00000489563 579 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC063943.2-201ENST00000495697 534 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC093767.1-201ENST00000504523 156 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC093815.1-201ENST00000508637 280 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC104057.1-201ENST00000515547 497 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 snoU109.6-201ENST00000516831 118 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 PSMA2P1-201ENST00000526365 646 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFAP04085 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFAP04085 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 AP005119.1-201ENST00000580956 292 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC026898.1-201ENST00000586404 571 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.09□□□□□ -1.43
PDGFAP04085 AL138895.2-201ENST00000603019 178 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC004805.3-201ENST00000603178 310 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC087763.1-201ENST00000603391 286 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC023813.4-201ENST00000607580 580 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AL133215.3-201ENST00000609801 448 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC104237.2-201ENST00000612456 443 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFAP04085 AC079597.1-201ENST00000624306 508 ntBASIC6.09□□□□□ -1.43
PDGFAP04085 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFAP04085 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.09□□□□□ -1.44
PDGFAP04085 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFAP04085 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFAP04085 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFAP04085 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
PDGFAP04085 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PDGFAP04085 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 MTND4P27-201ENST00000450813 1354 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC027575.3-201ENST00000583058 2747 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 AC011455.2-201ENST00000599320 3336 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFAP04085 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFAP04085 Y_RNA.234-201ENST00000364409 97 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFAP04085 SNORD37.1-201ENST00000390968 65 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC069218.2-201ENST00000411665 344 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC012065.2-201ENST00000421295 375 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 NMD3P2-201ENST00000421815 761 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC083862.1-201ENST00000427378 1242 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFAP04085 RPL5P7-201ENST00000444235 813 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 REG1CP-206ENST00000447469 496 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 RPL7P52-201ENST00000449200 742 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AL034399.1-201ENST00000451535 380 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC104073.1-201ENST00000451988 151 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 GM2AP2-201ENST00000491764 562 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFAP04085 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFAP04085 AC112206.3-201ENST00000514578 389 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 RN7SKP67-201ENST00000515905 235 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.08□□□□□ -1.44
PDGFAP04085 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFAP04085 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.08□□□□□ -1.44
PDGFAP04085 AL133399.1-201ENST00000527476 298 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFAP04085 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFAP04085 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFAP04085 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFAP04085 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFAP04085 AC068831.4-201ENST00000556118 109 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC023968.1-201ENST00000560719 475 ntBASIC6.08□□□□□ -1.44
PDGFAP04085 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms