Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 USP12PY-201ENST00000427677 1064 ntBASIC4.07□□□□□ -1.76
APOEP02649 AC017083.1-201ENST00000428093 483 ntBASIC4.07□□□□□ -1.76
APOEP02649 KCTD9P3-201ENST00000434597 1169 ntBASIC4.07□□□□□ -1.76
APOEP02649 AF228730.2-201ENST00000438784 848 ntBASIC4.07□□□□□ -1.76
APOEP02649 AC083863.1-201ENST00000438811 231 ntBASIC4.07□□□□□ -1.76
APOEP02649 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.07□□□□□ -1.76
APOEP02649 RPS29P7-201ENST00000439662 171 ntBASIC4.07□□□□□ -1.76
APOEP02649 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.07□□□□□ -1.76
APOEP02649 SNRPGP5-201ENST00000456003 220 ntBASIC4.07□□□□□ -1.76
APOEP02649 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
APOEP02649 OR9M1P-201ENST00000459641 921 ntBASIC4.07□□□□□ -1.76
APOEP02649 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.07□□□□□ -1.76
APOEP02649 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
APOEP02649 AC026402.1-201ENST00000513642 170 ntBASIC4.07□□□□□ -1.76
APOEP02649 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 AC087369.1-201ENST00000520775 996 ntBASIC4.07□□□□□ -1.76
APOEP02649 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.07□□□□□ -1.76
APOEP02649 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
APOEP02649 NPM1P47-201ENST00000560843 856 ntBASIC4.07□□□□□ -1.76
APOEP02649 RN7SL703P-201ENST00000578485 302 ntBASIC4.07□□□□□ -1.76
APOEP02649 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 AC015726.1-201ENST00000602353 681 ntBASIC4.07□□□□□ -1.76
APOEP02649 AL713998.2-201ENST00000604538 1198 ntBASIC4.07□□□□□ -1.76
APOEP02649 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.07□□□□□ -1.76
APOEP02649 CDRT1-208ENST00000630868 794 ntBASIC4.07□□□□□ -1.76
APOEP02649 AF001550.2-201ENST00000636643 217 ntBASIC4.07□□□□□ -1.76
APOEP02649 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
APOEP02649 FAM91A3P-201ENST00000456826 2544 ntBASIC4.06□□□□□ -1.76
APOEP02649 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
APOEP02649 AC066616.2-201ENST00000559334 1481 ntBASIC4.06□□□□□ -1.76
APOEP02649 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
APOEP02649 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
APOEP02649 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
APOEP02649 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
APOEP02649 Z98941.1-201ENST00000407764 100 ntBASIC4.06□□□□□ -1.76
APOEP02649 AC096644.3-201ENST00000416788 338 ntBASIC4.06□□□□□ -1.76
APOEP02649 OR6K4P-201ENST00000423179 955 ntBASIC4.06□□□□□ -1.76
APOEP02649 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
APOEP02649 ANP32BP2-201ENST00000454525 545 ntBASIC4.06□□□□□ -1.76
APOEP02649 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
APOEP02649 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.06□□□□□ -1.76
APOEP02649 NDUFA5P2-201ENST00000519723 344 ntBASIC4.06□□□□□ -1.76
APOEP02649 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.06□□□□□ -1.76
APOEP02649 AC109635.6-201ENST00000525487 1113 ntBASIC4.06□□□□□ -1.76
APOEP02649 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.06□□□□□ -1.76
APOEP02649 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
APOEP02649 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
APOEP02649 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.06□□□□□ -1.76
APOEP02649 AC022960.2-201ENST00000616300 666 ntBASIC4.06□□□□□ -1.76
APOEP02649 BX005019.1-201ENST00000561881 1810 ntBASIC4.06□□□□□ -1.76
APOEP02649 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.06□□□□□ -1.76
APOEP02649 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
APOEP02649 UBE3AP2-201ENST00000429033 2259 ntBASIC4.06□□□□□ -1.76
APOEP02649 MTCO1P14-201ENST00000441695 1559 ntBASIC4.06□□□□□ -1.76
APOEP02649 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
APOEP02649 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
APOEP02649 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 Y_RNA.126-201ENST00000363382 111 ntBASIC4.05□□□□□ -1.76
APOEP02649 RNU1-87P-201ENST00000363727 170 ntBASIC4.05□□□□□ -1.76
APOEP02649 RN7SKP280-201ENST00000364196 304 ntBASIC4.05□□□□□ -1.76
APOEP02649 RNU1-64P-201ENST00000365443 163 ntBASIC4.05□□□□□ -1.76
APOEP02649 RNU6-213P-201ENST00000384051 104 ntBASIC4.05□□□□□ -1.76
APOEP02649 RNU1-89P-201ENST00000384592 164 ntBASIC4.05□□□□□ -1.76
APOEP02649 RNA5SP105-201ENST00000391123 113 ntBASIC4.05□□□□□ -1.76
APOEP02649 ZNF602P-201ENST00000405929 924 ntBASIC4.05□□□□□ -1.76
APOEP02649 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.05□□□□□ -1.76
APOEP02649 AL159169.1-201ENST00000421119 127 ntBASIC4.05□□□□□ -1.76
APOEP02649 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.05□□□□□ -1.76
APOEP02649 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.05□□□□□ -1.76
APOEP02649 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.05□□□□□ -1.76
APOEP02649 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.05□□□□□ -1.76
APOEP02649 AL139099.1-201ENST00000497398 403 ntBASIC4.05□□□□□ -1.76
APOEP02649 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
APOEP02649 AC010342.1-201ENST00000514047 877 ntBASIC4.05□□□□□ -1.76
APOEP02649 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 OR4C2P-201ENST00000530855 1064 ntBASIC4.05□□□□□ -1.76
APOEP02649 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.05□□□□□ -1.76
APOEP02649 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 AC025423.2-201ENST00000537570 439 ntBASIC4.05□□□□□ -1.76
APOEP02649 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.05□□□□□ -1.76
APOEP02649 CYCSP30-201ENST00000546447 172 ntBASIC4.05□□□□□ -1.76
APOEP02649 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.05□□□□□ -1.76
APOEP02649 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.05□□□□□ -1.76
APOEP02649 AL034351.1-201ENST00000605288 668 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms