Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC004775.1-201ENST00000607389 753 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 FAM27D1-201ENST00000612308 341 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AP006248.3-201ENST00000623580 594 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFBP01127 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFBP01127 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC025125.1-201ENST00000624743 1922 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 HSPA8P19-201ENST00000505359 1517 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC000374.1-201ENST00000434698 1745 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 RPL21P67-201ENST00000402896 478 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 UBE2V1P11-201ENST00000411559 285 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 KRR1P1-201ENST00000419430 803 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 IPMKP1-201ENST00000425988 855 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PDGFBP01127 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
PDGFBP01127 CDY14P-201ENST00000431260 1014 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC023347.2-201ENST00000433994 462 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 ELOCP11-201ENST00000436690 332 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFBP01127 CDY12P-201ENST00000440679 1015 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 ELOCP16-201ENST00000444494 332 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 CDY13P-201ENST00000445813 1015 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 FTH1P25-201ENST00000447665 469 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 CDY23P-201ENST00000451661 1014 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 RPL7P15-201ENST00000461190 712 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 PLGLA-201ENST00000465668 449 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 RPL35AP15-201ENST00000468042 339 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 HMGB1P21-201ENST00000502313 581 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC103833.1-201ENST00000517442 172 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 PAICSP4-201ENST00000517543 1253 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AC105031.1-201ENST00000518550 476 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC120057.2-201ENST00000571520 271 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 AL158211.2-201ENST00000607282 395 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 OR6R2P-201ENST00000609216 300 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 AL391261.4-201ENST00000616012 481 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 LINC00901.1-201ENST00000617252 152 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
PDGFBP01127 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
PDGFBP01127 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFBP01127 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFBP01127 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFBP01127 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFBP01127 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 Y_RNA.110-201ENST00000363220 99 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 RNU6-1279P-201ENST00000383917 103 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 NDUFB4P4-201ENST00000404822 243 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 VTA1P1-201ENST00000414044 866 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 COX5BP7-201ENST00000414780 274 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AC115285.1-201ENST00000424879 736 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 BX119904.1-201ENST00000432026 348 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 MTND2P30-201ENST00000456663 382 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AC021660.1-201ENST00000465006 554 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AL049829.1-201ENST00000465411 156 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 RPL23AP71-201ENST00000470966 469 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 DUXAP2-201ENST00000519198 589 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 COX6B1P6-201ENST00000522347 255 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 DEFB109D-201ENST00000529497 240 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFBP01127 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFBP01127 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
PDGFBP01127 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms