Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 TPTE2P6-202ENST00000445572 1007 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN9O95484 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN9O95484 AC104687.1-201ENST00000485829 412 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 AC010285.3-201ENST00000511668 676 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 AC022968.1-201ENST00000567372 442 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 AC005242.1-201ENST00000585658 438 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 AC078899.5-201ENST00000612475 178 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 MLECP1-201ENST00000615893 709 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 U6.48-201ENST00000618523 106 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 MIR4727-201ENST00000622232 55 ntBASIC3.92□□□□□ -1.78
CLDN9O95484 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN9O95484 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 AC005261.4-201ENST00000600047 1385 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 OR5T3-201ENST00000303059 1023 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 RN7SKP27-201ENST00000410684 333 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 MTCO3P4-201ENST00000419236 787 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 FO393419.3-201ENST00000428741 282 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC011742.1-201ENST00000431448 434 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 YWHAEP5-201ENST00000431545 765 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN9O95484 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 AL451050.1-201ENST00000450126 415 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 FABP3P2-201ENST00000453169 399 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN9O95484 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC111193.1-201ENST00000504097 155 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN9O95484 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 SLC25A15P5-201ENST00000508033 253 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 AL121594.4-201ENST00000556211 1196 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC006116.5-201ENST00000591936 559 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 BNIP3P33-201ENST00000598912 569 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC079791.1-201ENST00000605356 973 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 ARF4P1-201ENST00000605447 541 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 AC016717.3-201ENST00000624730 554 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN9O95484 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN9O95484 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN9O95484 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.91□□□□□ -1.78
CLDN9O95484 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN9O95484 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN9O95484 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN9O95484 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.9□□□□□ -1.78
CLDN9O95484 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN9O95484 OR11H4-201ENST00000315409 1082 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN9O95484 RNU6-1279P-201ENST00000383917 103 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AL590290.1-201ENST00000405336 380 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AL603766.1-201ENST00000407763 664 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 HSPE1P12-201ENST00000412576 301 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AC108032.1-201ENST00000416706 207 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 RPL17P36-201ENST00000420302 549 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AC087650.1-201ENST00000431445 468 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AC096638.2-201ENST00000434965 711 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 ELOCP11-201ENST00000436690 332 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN9O95484 ELOCP16-201ENST00000444494 332 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN9O95484 RPL23AP2-201ENST00000471227 466 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 IGBP1P5-201ENST00000507524 1000 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 IGKV2-36-201ENST00000519999 223 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN9O95484 MTND4LP24-201ENST00000572277 291 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN9O95484 MIR3138-201ENST00000585238 82 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN9O95484 AC100814.1-201ENST00000606963 623 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AL355802.4-201ENST00000607635 548 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AP003392.5-201ENST00000607857 415 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 AC010608.2-201ENST00000624830 470 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN9O95484 MIR6715B-201ENST00000637172 77 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN9O95484 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN9O95484 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN9O95484 MAPK10-253ENST00000641010 4072 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms