Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEMA3DO95025 IPO8P1-201ENST00000455509 3109 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEMA3DO95025 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
SEMA3DO95025 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEMA3DO95025 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MT-TP-201ENST00000387461 68 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 ST13P16-201ENST00000401760 781 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SEMA3DO95025 RPL7AP73-201ENST00000413490 353 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC115285.1-201ENST00000424879 736 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.82□□□□□ -1.8
SEMA3DO95025 HIGD1AP4-201ENST00000430194 280 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.82□□□□□ -1.8
SEMA3DO95025 ATP5HP2-201ENST00000433885 485 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 AC083863.1-201ENST00000438811 231 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 RN7SL860P-201ENST00000473738 223 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.82□□□□□ -1.8
SEMA3DO95025 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.82□□□□□ -1.8
SEMA3DO95025 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SEMA3DO95025 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MIR3939-201ENST00000582614 106 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MRPS35P3-201ENST00000603189 709 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AL445423.1-201ENST00000609941 536 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 MLECP1-201ENST00000615893 709 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AL133370.2-201ENST00000619934 439 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC090506.2-201ENST00000624521 419 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.82□□□□□ -1.8
SEMA3DO95025 MIR492-201ENST00000638676 116 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 OR5AC4P-202ENST00000642086 985 ntBASIC3.82□□□□□ -1.8
SEMA3DO95025 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
SEMA3DO95025 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEMA3DO95025 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL021368.2-201ENST00000606125 5352 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC087565.3-202ENST00000642085 1603 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SEMA3DO95025 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 RNU6-618P-201ENST00000363518 112 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 RNU6-670P-201ENST00000364312 104 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 MIR124-3-201ENST00000384866 87 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AL034403.1-201ENST00000399414 885 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.81□□□□□ -1.8
SEMA3DO95025 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.81□□□□□ -1.8
SEMA3DO95025 RPS12P23-201ENST00000419579 400 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL159169.1-201ENST00000421119 127 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.81□□□□□ -1.8
SEMA3DO95025 HMGB1P32-201ENST00000425971 565 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC016712.1-201ENST00000431088 378 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.81□□□□□ -1.8
SEMA3DO95025 Z85994.2-201ENST00000434327 452 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AL356276.2-201ENST00000435919 558 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC093716.1-201ENST00000435923 377 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 HMGB1P37-201ENST00000439613 609 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 CEACAMP4-201ENST00000457676 421 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC010618.1-201ENST00000469924 477 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 TRAV31-201ENST00000502780 342 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.81□□□□□ -1.8
SEMA3DO95025 AC069366.1-201ENST00000583159 838 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AF230666.2-201ENST00000602328 725 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms