Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.92□□□□□ -1.78
SHOX2O60902 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
SHOX2O60902 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHOX2O60902 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
SHOX2O60902 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.91□□□□□ -1.78
SHOX2O60902 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 RPS15AP6-201ENST00000420703 385 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.91□□□□□ -1.78
SHOX2O60902 PPIAP21-201ENST00000464473 501 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 CYCSP20-201ENST00000473154 315 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AL133372.1-201ENST00000493565 745 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.91□□□□□ -1.78
SHOX2O60902 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.91□□□□□ -1.78
SHOX2O60902 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.91□□□□□ -1.78
SHOX2O60902 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AC087888.1-201ENST00000550884 1254 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.91□□□□□ -1.78
SHOX2O60902 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.91□□□□□ -1.78
SHOX2O60902 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.91□□□□□ -1.78
SHOX2O60902 KLKP1-201ENST00000595979 403 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.91□□□□□ -1.78
SHOX2O60902 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.91□□□□□ -1.78
SHOX2O60902 AC090953.1-201ENST00000604305 1092 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AC012409.3-201ENST00000611343 981 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHOX2O60902 AL161637.1-201ENST00000622380 412 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 AP006248.2-201ENST00000623309 592 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SHOX2O60902 AL592437.2-201ENST00000421655 2434 ntBASIC3.91□□□□□ -1.78
SHOX2O60902 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.91□□□□□ -1.78
SHOX2O60902 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SHOX2O60902 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.78
SHOX2O60902 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHOX2O60902 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.9□□□□□ -1.78
SHOX2O60902 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.78
SHOX2O60902 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHOX2O60902 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHOX2O60902 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHOX2O60902 SNORA70.4-201ENST00000365509 134 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHOX2O60902 RPL23AP59-201ENST00000399415 461 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.9□□□□□ -1.79
SHOX2O60902 RNU6-55P-201ENST00000411092 107 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RNU6-954P-201ENST00000411355 107 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RPS7P13-201ENST00000413955 498 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHOX2O60902 RCC2P2-201ENST00000422174 918 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 AC009480.2-201ENST00000422916 432 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.9□□□□□ -1.79
SHOX2O60902 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.9□□□□□ -1.79
SHOX2O60902 CYCSP42-201ENST00000450823 238 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 CALM1P2-201ENST00000452941 448 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RPL7P1-201ENST00000468161 747 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RPL7P9-201ENST00000468715 747 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.9□□□□□ -1.79
SHOX2O60902 NPM1P17-201ENST00000479221 602 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 FCF1P3-201ENST00000496394 590 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RN7SKP122-201ENST00000515923 296 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 RNA5SP519-201ENST00000516480 119 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.9□□□□□ -1.79
SHOX2O60902 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.9□□□□□ -1.79
SHOX2O60902 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.9□□□□□ -1.79
SHOX2O60902 AC068790.7-201ENST00000602347 528 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
SHOX2O60902 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.9□□□□□ -1.79
SHOX2O60902 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.9□□□□□ -1.79
SHOX2O60902 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHOX2O60902 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SHOX2O60902 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHOX2O60902 MT-TP-201ENST00000387461 68 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHOX2O60902 AL136116.1-201ENST00000403591 381 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 MTCO3P31-201ENST00000405526 789 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AMZ2P2-201ENST00000406819 1057 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 RPL7AP73-201ENST00000413490 353 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 OSTCP5-201ENST00000425293 453 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms