Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC006499.2-201ENST00000513470 337 ntBASIC6.24□□□□□ -1.41
SOX1O00570 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX1O00570 AC092375.1-201ENST00000550410 637 ntBASIC6.24□□□□□ -1.41
SOX1O00570 DPPA3P2-202ENST00000557188 1219 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX1O00570 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX1O00570 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.24□□□□□ -1.41
SOX1O00570 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 AC243773.3-201ENST00000613270 256 ntBASIC6.24□□□□□ -1.41
SOX1O00570 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 AC090527.3-201ENST00000619041 548 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AC068831.8-201ENST00000620171 435 ntBASIC6.24□□□□□ -1.41
SOX1O00570 MIR7703-201ENST00000620784 77 ntBASIC6.24□□□□□ -1.41
SOX1O00570 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
SOX1O00570 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
SOX1O00570 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 AC011493.1-201ENST00000596753 1632 ntBASIC6.24□□□□□ -1.41
SOX1O00570 NCOA4P3-201ENST00000513203 1877 ntBASIC6.24□□□□□ -1.41
SOX1O00570 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX1O00570 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
SOX1O00570 AC010624.4-201ENST00000597606 1351 ntBASIC6.23□□□□□ -1.41
SOX1O00570 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 AC087516.1-201ENST00000561236 2428 ntBASIC6.23□□□□□ -1.41
SOX1O00570 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 RNA5SP487-201ENST00000410186 122 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX1O00570 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 RPL7P54-201ENST00000438336 674 ntBASIC6.23□□□□□ -1.41
SOX1O00570 SNRPEP7-201ENST00000438350 220 ntBASIC6.23□□□□□ -1.41
SOX1O00570 CBX1P1-201ENST00000440184 427 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AL513533.1-201ENST00000453728 415 ntBASIC6.23□□□□□ -1.41
SOX1O00570 RNU6-420P-201ENST00000458780 107 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 AC023194.1-201ENST00000493084 308 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.23□□□□□ -1.41
SOX1O00570 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX1O00570 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX1O00570 AC012182.1-201ENST00000570133 895 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AL161734.1-201ENST00000609720 557 ntBASIC6.23□□□□□ -1.41
SOX1O00570 AP006248.2-201ENST00000623309 592 ntBASIC6.23□□□□□ -1.41
SOX1O00570 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SOX1O00570 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX1O00570 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX1O00570 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 AC010928.1-201ENST00000592477 1447 ntBASIC6.23□□□□□ -1.41
SOX1O00570 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX1O00570 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SOX1O00570 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 AC090017.1-201ENST00000548612 1779 ntBASIC6.22□□□□□ -1.41
SOX1O00570 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 AL159987.1-201ENST00000347911 293 ntBASIC6.22□□□□□ -1.41
SOX1O00570 Y_RNA.58-201ENST00000362807 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 Y_RNA.154-201ENST00000363624 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RNY3P1-201ENST00000365085 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RNY3-201ENST00000365484 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 Y_RNA.394-201ENST00000383942 103 ntBASIC6.22□□□□□ -1.41
SOX1O00570 Y_RNA.419-201ENST00000384041 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 Y_RNA.490-201ENST00000384413 102 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RN7SKP266-201ENST00000410232 287 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AL359704.1-201ENST00000411586 781 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC211486.3-201ENST00000412694 621 ntBASIC6.22□□□□□ -1.41
SOX1O00570 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 RPS4XP5-201ENST00000419038 768 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RPL7P57-201ENST00000423238 740 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC108075.1-201ENST00000424692 529 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 AL589872.1-201ENST00000426602 288 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms