Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 HMGN1P8-201ENST00000463578 288 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 RN7SL385P-201ENST00000468873 276 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 S100A11P1-201ENST00000477525 312 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK1AO00322 SEC11B-201ENST00000518383 499 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 DEFB109D-201ENST00000529497 240 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 CBX3P5-201ENST00000552017 521 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 NPM1P47-201ENST00000560843 856 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.62□□□□□ -1.83
UPK1AO00322 AC120057.2-201ENST00000571520 271 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC136624.4-201ENST00000573044 370 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 AC138473.1-201ENST00000605717 526 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK1AO00322 RNA5SP196-201ENST00000625967 102 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK1AO00322 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1AO00322 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1AO00322 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
UPK1AO00322 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK1AO00322 CYP1D1P-201ENST00000416662 1433 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
UPK1AO00322 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 RNU6-225P-201ENST00000384613 103 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK1AO00322 MOB1AP1-201ENST00000430903 535 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 HSFY6P-201ENST00000445573 403 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 EIF4A1P11-201ENST00000451239 222 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC098824.1-201ENST00000453565 980 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 DNAJC19P1-201ENST00000455312 319 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC104629.2-201ENST00000468627 598 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC084198.1-201ENST00000477747 402 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 TPT1P3-201ENST00000492841 512 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK1AO00322 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 SUMO2P20-201ENST00000520803 283 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK1AO00322 RFPL1S-203ENST00000539579 330 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC068446.3-201ENST00000555285 382 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 BMS1P7-201ENST00000602440 1052 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 AC092159.4-201ENST00000624944 550 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 OR5AC4P-202ENST00000642086 985 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 AC009313.2-201ENST00000417893 1941 ntBASIC3.61□□□□□ -1.83
UPK1AO00322 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK1AO00322 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK1AO00322 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.61□□□□□ -1.83
UPK1AO00322 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 RN7SKP44-201ENST00000363602 316 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 RNU6-283P-201ENST00000364788 107 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 RNA5SP97-201ENST00000365006 84 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 RNA5SP283-201ENST00000365604 119 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 AC099336.2-201ENST00000422457 254 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms