Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHISA3A0PJX4 AC010168.2-201ENST00000562691 5428 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 LINC02019-201ENST00000608605 2060 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RNU6-169P-201ENST00000365336 107 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AL356967.1-201ENST00000406305 431 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AL353678.1-201ENST00000422735 741 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 SETP9-201ENST00000423837 832 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AHCYP8-201ENST00000425108 209 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 SRIP2-201ENST00000428470 166 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 PUDPP2-201ENST00000431423 643 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC236972.2-201ENST00000434979 310 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AP000936.3-201ENST00000438127 255 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 TRBV26-201ENST00000456572 344 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RNU7-63P-201ENST00000459054 62 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RN7SL868P-201ENST00000485915 303 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RPS15AP36-201ENST00000492022 382 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC010343.2-201ENST00000510162 224 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC022616.3-201ENST00000523940 148 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC023050.3-201ENST00000541142 333 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC083837.1-201ENST00000565297 2994 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 MIR3671-201ENST00000580455 88 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC010591.1-201ENST00000603941 649 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AL603758.1-201ENST00000618654 241 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC022106.2-201ENST00000620114 757 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC006453.3-201ENST00000635891 377 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC105074.1-201ENST00000623380 3095 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ZNF652P1-201ENST00000442420 1309 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC114546.3-201ENST00000623582 1734 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 AC140479.2-201ENST00000421567 3130 ntBASIC5.37□□□□□ -1.55
SHISA3A0PJX4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.37□□□□□ -1.55
SHISA3A0PJX4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RPL7P26-201ENST00000333817 754 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RNA5SP382-201ENST00000363355 112 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RNA5SP394-201ENST00000364216 119 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.315-201ENST00000365117 102 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL136116.1-201ENST00000403591 381 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 MTND3P8-201ENST00000412909 339 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC245096.1-201ENST00000413104 546 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 BX276092.6-201ENST00000430476 250 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL049734.2-201ENST00000441066 616 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 HSPE1P28-201ENST00000443139 211 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 HIGD1AP16-201ENST00000450986 258 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 BX276092.8-201ENST00000455722 250 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RBMY2EP-202ENST00000456360 940 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL133480.2-201ENST00000456723 487 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RPL23AP41-201ENST00000484754 458 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RN7SL714P-201ENST00000487050 298 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RPL10P7-201ENST00000495649 625 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms