Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC021146.8-201ENST00000507455 733 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC110775.1-201ENST00000513721 462 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC118465.1-201ENST00000513820 1271 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 HNRNPKP5-201ENST00000515300 253 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RN7SKP147-201ENST00000517154 244 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 UBE2NP1-201ENST00000545592 458 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RN7SL802P-201ENST00000577858 299 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MIR4458-201ENST00000578872 75 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MIR4646-201ENST00000580775 63 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC006539.2-201ENST00000601729 572 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC112220.3-201ENST00000605502 502 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC113194.1-201ENST00000606037 500 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC067852.7-201ENST00000623270 535 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MIR4496-201ENST00000635896 61 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 SCARNA15-201ENST00000607520 4325 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 EIF2AP4-201ENST00000424793 1781 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 ZNF33CP-201ENST00000432492 2030 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 THAP12P4-201ENST00000528321 2266 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.49
COL4A3BPQ9Y5P4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.71□□□□□ -1.49
COL4A3BPQ9Y5P4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL4A3BPQ9Y5P4 CASC19-221ENST00000641309 1382 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 RNU6-657P-201ENST00000383904 107 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR1284-201ENST00000408337 120 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP125-201ENST00000410481 302 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL31P2-201ENST00000413849 377 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC004987.3-201ENST00000413879 771 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC098592.1-201ENST00000419352 333 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 DDX39BP1-205ENST00000422507 192 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092427.1-201ENST00000439177 601 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MTATP6P26-201ENST00000445926 662 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 BX276092.4-201ENST00000452056 248 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092757.1-201ENST00000467293 467 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC00888-204ENST00000487386 421 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 NIFKP7-201ENST00000503365 834 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 ENPP7P11-201ENST00000505915 627 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MRPS33P3-201ENST00000513456 322 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC133644.2-201ENST00000608142 540 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL159169.3-201ENST00000608871 561 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC093799.2-201ENST00000610062 578 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC097505.1-201ENST00000610199 565 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AL360219.1-201ENST00000610230 366 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.71□□□□□ -1.5
COL4A3BPQ9Y5P4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms