Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC053481.1-201ENST00000467217 306 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC015908.1-201ENST00000478739 476 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 SETP6-201ENST00000479329 568 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC090686.1-201ENST00000481577 749 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 MTATP6P22-201ENST00000507369 598 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC121161.1-201ENST00000510606 652 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL7L1P13-201ENST00000511702 739 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SKP96-201ENST00000516948 297 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC015914.2-201ENST00000618167 288 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC073569.3-201ENST00000619055 682 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC006065.6-201ENST00000625201 545 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC132825.7-201ENST00000638744 335 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 MFSD8-213ENST00000641134 1327 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC017007.4-201ENST00000503353 1352 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC005261.4-201ENST00000600047 1385 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR525-201ENST00000384978 85 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP317-201ENST00000410176 116 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP311-201ENST00000411290 116 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 MTCO2P1-201ENST00000424648 477 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC008065.1-201ENST00000428525 348 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 NPM1P34-201ENST00000428821 893 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL031584.1-201ENST00000447169 754 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL7P55-201ENST00000450522 746 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SNORA84-201ENST00000459229 133 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AP002812.1-201ENST00000495378 474 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 HPRT1P2-201ENST00000505250 544 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SAP18P1-201ENST00000512058 390 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 HMGN1P15-201ENST00000513870 295 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC008494.2-201ENST00000514544 370 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP315-201ENST00000516340 116 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP312-201ENST00000517068 116 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC010680.4-201ENST00000605334 543 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL591034.3-201ENST00000605511 685 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC016542.1-201ENST00000608259 493 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RMST_10.1-201ENST00000616309 154 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL109620.1-201ENST00000618738 1197 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AP003400.6-201ENST00000624698 740 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL596275.2-204ENST00000641628 552 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AL596275.2-206ENST00000641957 626 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC138393.1-206ENST00000540997 1886 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PCDHGA1Q9Y5H4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RNU6-543P-201ENST00000362576 108 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 SNORD56.4-201ENST00000363883 71 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CYCSP10-201ENST00000417973 294 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL389915.1-201ENST00000422463 466 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AP001324.1-201ENST00000428553 399 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CDY14P-201ENST00000431260 1014 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms