Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC068134.3-201ENST00000513620 788 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 SCARNA21.2-201ENST00000516600 166 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 pRNA.12-201ENST00000614353 90 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 pRNA.3-201ENST00000615048 90 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 MIR4679-1-201ENST00000637619 75 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 Z75746.1-201ENST00000440243 2080 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC008555.1-201ENST00000561778 2757 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 HSPA8P14-201ENST00000552265 1805 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC022034.1-201ENST00000512867 2156 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 RNU6-708P-201ENST00000384217 107 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 RNU6-1035P-201ENST00000384477 107 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 SNORD94-201ENST00000386037 137 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AP003170.5-201ENST00000397185 335 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 PUDPP2-201ENST00000431423 643 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC093414.1-201ENST00000434712 514 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 DAP3P1-201ENST00000441522 278 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 RPL23AP81-201ENST00000455252 467 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AL139099.1-201ENST00000497398 403 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC024451.1-201ENST00000508013 779 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 IGHVII-53-1-201ENST00000519538 255 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC136932.1-201ENST00000574771 208 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC140658.6-201ENST00000603958 201 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC141002.1-201ENST00000607025 279 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AC000068.3-201ENST00000607934 427 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 AL121835.2-201ENST00000624253 3502 ntBASIC7.11□□□□□ -1.27
LHX6Q9UPM6 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LHX6Q9UPM6 IRF5P1-201ENST00000504852 2164 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 SND1-IT1-201ENST00000623342 2481 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 RNA5SP232-201ENST00000364144 119 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 RNU1-122P-201ENST00000365538 156 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 RNA5SP185-201ENST00000390963 114 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AL023284.3-201ENST00000407767 334 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC017079.2-201ENST00000416102 485 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms