Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 SUB1P2-201ENST00000556401 297 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 MIR4433B-201ENST00000581329 102 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AP001823.1-201ENST00000604056 1003 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AL133173.2-201ENST00000614270 90 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC090527.3-201ENST00000619041 548 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SALL4Q9UJQ4 AC024560.2-201ENST00000507981 1497 ntBASIC6.34□□□□□ -1.4
SALL4Q9UJQ4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
SALL4Q9UJQ4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SALL4Q9UJQ4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.34□□□□□ -1.4
SALL4Q9UJQ4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 FRG1BP-201ENST00000278882 761 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 OR52B1P-201ENST00000316506 909 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 OR9K1P-201ENST00000326513 941 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 FRG1CP-201ENST00000358464 769 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 OR10R3P-201ENST00000361688 942 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RN7SKP128-201ENST00000364270 303 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 SNORA51.2-201ENST00000364595 132 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RNU6-282P-201ENST00000365357 103 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RN7SKP269-201ENST00000365545 319 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 GCNT1P4-201ENST00000404096 329 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL356432.1-201ENST00000405809 419 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC211486.3-201ENST00000412694 621 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 NME1P1-201ENST00000420914 382 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RIMKLBP2-201ENST00000424737 654 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC115283.1-201ENST00000427353 400 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 MTCO2P12-201ENST00000427426 682 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 SAR1AP4-201ENST00000429225 591 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RPSAP65-201ENST00000429660 595 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL365400.1-201ENST00000431854 640 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL389925.1-201ENST00000432257 728 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL031663.1-201ENST00000437445 219 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 OR3D1P-201ENST00000438288 955 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC073909.1-201ENST00000447112 999 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL513533.1-201ENST00000453728 415 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC021660.1-201ENST00000465006 554 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC093815.1-201ENST00000508637 280 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 NANOGNBP2-201ENST00000544753 553 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC060780.2-201ENST00000589047 198 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC006115.2-201ENST00000596823 202 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC027243.2-201ENST00000602530 724 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC068790.5-201ENST00000602741 355 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 RPSAP75-201ENST00000605848 301 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL365204.3-201ENST00000612448 685 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 THAP12P9-201ENST00000503971 2360 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CCT4P2-201ENST00000233836 1548 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 CKAP2P1-201ENST00000555477 2049 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 NMD3P1-201ENST00000439704 1488 ntBASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms