Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC010200.2-201ENST00000605098 235 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC073111.2-201ENST00000605657 1075 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC135803.1-201ENST00000608748 565 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC006213.4-201ENST00000616184 634 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC004825.2-201ENST00000616634 455 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 CASC19-261ENST00000641853 1638 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 FAM91A3P-201ENST00000456826 2544 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MIR421-201ENST00000365696 85 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MIR134-201ENST00000385258 73 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MTND2P11-201ENST00000423638 648 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL358472.1-201ENST00000431295 329 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MRPS33P4-201ENST00000434892 317 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL627224.1-201ENST00000448334 444 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC006517.1-201ENST00000480485 328 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 SYT14P1-201ENST00000481459 721 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC108471.1-201ENST00000513977 287 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC016550.3-201ENST00000515706 767 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MIR4286-201ENST00000580651 93 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MIMT1-201ENST00000597105 1050 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC100814.1-201ENST00000606963 623 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC090246.1-201ENST00000616499 426 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AP003400.6-201ENST00000624698 740 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 AC022893.2-201ENST00000564832 3296 ntBASIC4.8□□□□□ -1.64
CLIP2Q9UDT6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 ERCC6-202ENST00000374127 1782 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AL157827.1-201ENST00000447622 132 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 HMGB3P22-202ENST00000451823 572 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AL645939.1-201ENST00000453429 797 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 MTND6P6-201ENST00000478031 263 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC010627.1-201ENST00000503819 1294 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC010460.1-201ENST00000507087 466 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC053481.4-201ENST00000583164 216 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC093227.2-201ENST00000589357 285 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC090953.1-201ENST00000604305 1092 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC103858.2-201ENST00000621471 543 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 AC092162.3-201ENST00000624511 1624 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 NOL8P1-201ENST00000508336 3529 ntBASIC4.79□□□□□ -1.64
CLIP2Q9UDT6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 MIR3074-201ENST00000384885 81 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 RN7SKP222-201ENST00000410651 315 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms